Gene : Medtr7g056400 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33385:SF4 - PROTEIN XRI1 Description:  X-ray induced transcript protein, putative
Genomic Order:  2127 Name:  ? Medtr7g056400
Secondary Identifier:  ? PAC:31081083
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g056400 0.5kb upstream 0.5kb upstream 5520 true chr7: 19896539-19902058 Medicago truncatula
Medtr7g056400 0.5kb upstream 0.5kb upstream 500 false chr7: 19896539-19897038 Medicago truncatula
Medtr7g056400 0.5kb downstream 0.5kb downstream 5520 true chr7: 19897039-19902558 Medicago truncatula
Medtr7g056400 0.5kb downstream 0.5kb downstream 500 false chr7: 19902059-19902558 Medicago truncatula
Medtr7g056400 1.0kb upstream 1.0kb upstream 6020 true chr7: 19896039-19902058 Medicago truncatula
Medtr7g056400 1.0kb upstream 1.0kb upstream 1000 false chr7: 19896039-19897038 Medicago truncatula
Medtr7g056400 1.0kb downstream 1.0kb downstream 6020 true chr7: 19897039-19903058 Medicago truncatula
Medtr7g056400 1.0kb downstream 1.0kb downstream 1000 false chr7: 19902059-19903058 Medicago truncatula
Medtr7g056400 2.0kb upstream 2.0kb upstream 7020 true chr7: 19895039-19902058 Medicago truncatula
Medtr7g056400 2.0kb upstream 2.0kb upstream 2000 false chr7: 19895039-19897038 Medicago truncatula
Medtr7g056400 2.0kb downstream 2.0kb downstream 7020 true chr7: 19897039-19904058 Medicago truncatula
Medtr7g056400 2.0kb downstream 2.0kb downstream 2000 false chr7: 19902059-19904058 Medicago truncatula
Medtr7g056400 5.0kb upstream 5.0kb upstream 10020 true chr7: 19892039-19902058 Medicago truncatula
Medtr7g056400 5.0kb upstream 5.0kb upstream 5000 false chr7: 19892039-19897038 Medicago truncatula
Medtr7g056400 5.0kb downstream 5.0kb downstream 10020 true chr7: 19897039-19907058 Medicago truncatula
Medtr7g056400 5.0kb downstream 5.0kb downstream 5000 false chr7: 19902059-19907058 Medicago truncatula
Medtr7g056400 10.0kb upstream 10.0kb upstream 15020 true chr7: 19887039-19902058 Medicago truncatula
Medtr7g056400 10.0kb upstream 10.0kb upstream 10000 false chr7: 19887039-19897038 Medicago truncatula
Medtr7g056400 10.0kb downstream 10.0kb downstream 15020 true chr7: 19897039-19912058 Medicago truncatula
Medtr7g056400 10.0kb downstream 10.0kb downstream 10000 false chr7: 19902059-19912058 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297583 5265 Fabidae View MSA
124050425 5270 Rosid View MSA
123749670 5271 Pentapetalae View MSA
122786653 5272 Eudicot View MSA
122050817 5273 Angiosperm View MSA
121348278 5274 Embryophyte View MSA
123380804 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.642       High
cufflinks 1.066        
cufflinks 1.253        
cufflinks 1.141        
cufflinks 1.067        
cufflinks 0.64       Low
cufflinks 1.29        
cufflinks 0.978        
cufflinks 1.122        

0 Strain