Gene : Medtr7g058550 M. truncatula Mt4.0v1
Defline:  (1 of 15) PF00069//PF00954//PF01453 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) Description:  Serine/Threonine kinase, plant-type protein
Genomic Order:  2276 Name:  ? Medtr7g058550
Secondary Identifier:  ? PAC:31083610
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g058550 0.5kb upstream 0.5kb upstream 2937 true chr7: 21105973-21108909 Medicago truncatula
Medtr7g058550 0.5kb upstream 0.5kb upstream 500 false chr7: 21105973-21106472 Medicago truncatula
Medtr7g058550 0.5kb downstream 0.5kb downstream 2937 true chr7: 21106473-21109409 Medicago truncatula
Medtr7g058550 0.5kb downstream 0.5kb downstream 500 false chr7: 21108910-21109409 Medicago truncatula
Medtr7g058550 1.0kb upstream 1.0kb upstream 3437 true chr7: 21105473-21108909 Medicago truncatula
Medtr7g058550 1.0kb upstream 1.0kb upstream 1000 false chr7: 21105473-21106472 Medicago truncatula
Medtr7g058550 1.0kb downstream 1.0kb downstream 3437 true chr7: 21106473-21109909 Medicago truncatula
Medtr7g058550 1.0kb downstream 1.0kb downstream 1000 false chr7: 21108910-21109909 Medicago truncatula
Medtr7g058550 2.0kb upstream 2.0kb upstream 4437 true chr7: 21104473-21108909 Medicago truncatula
Medtr7g058550 2.0kb upstream 2.0kb upstream 2000 false chr7: 21104473-21106472 Medicago truncatula
Medtr7g058550 2.0kb downstream 2.0kb downstream 4437 true chr7: 21106473-21110909 Medicago truncatula
Medtr7g058550 2.0kb downstream 2.0kb downstream 2000 false chr7: 21108910-21110909 Medicago truncatula
Medtr7g058550 5.0kb upstream 5.0kb upstream 7437 true chr7: 21101473-21108909 Medicago truncatula
Medtr7g058550 5.0kb upstream 5.0kb upstream 5000 false chr7: 21101473-21106472 Medicago truncatula
Medtr7g058550 5.0kb downstream 5.0kb downstream 7437 true chr7: 21106473-21113909 Medicago truncatula
Medtr7g058550 5.0kb downstream 5.0kb downstream 5000 false chr7: 21108910-21113909 Medicago truncatula
Medtr7g058550 10.0kb upstream 10.0kb upstream 12437 true chr7: 21096473-21108909 Medicago truncatula
Medtr7g058550 10.0kb upstream 10.0kb upstream 10000 false chr7: 21096473-21106472 Medicago truncatula
Medtr7g058550 10.0kb downstream 10.0kb downstream 12437 true chr7: 21106473-21118909 Medicago truncatula
Medtr7g058550 10.0kb downstream 10.0kb downstream 10000 false chr7: 21108910-21118909 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048151 5273 Angiosperm View MSA
122314449 5265 Fabidae View MSA
124071977 5270 Rosid View MSA
123751371 5271 Pentapetalae View MSA
122773994 5272 Eudicot View MSA
121310866 5274 Embryophyte View MSA
123348250 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.406        
cufflinks 0.686        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.053        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low Low
cufflinks 0.457        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain