Gene : Medtr7g117050 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11588:SF7 - TUBULIN GAMMA CHAIN Description:  tubulin
Genomic Order:  6093 Name:  ? Medtr7g117050
Secondary Identifier:  ? PAC:31083702
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5695 Medicago truncatula pathologic  
Mtruncatula PWY-6608 Medicago truncatula pathologic  
Mtruncatula PWY-6609 Medicago truncatula pathologic  
Mtruncatula PWY-7179 Medicago truncatula pathologic  
Mtruncatula SALVADEHYPOX-PWY Medicago truncatula pathologic  
Mtruncatula URSIN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g117050 0.5kb upstream 0.5kb upstream 5425 true chr7: 48327570-48332994 Medicago truncatula
Medtr7g117050 0.5kb upstream 0.5kb upstream 500 false chr7: 48332495-48332994 Medicago truncatula
Medtr7g117050 0.5kb downstream 0.5kb downstream 5425 true chr7: 48327070-48332494 Medicago truncatula
Medtr7g117050 0.5kb downstream 0.5kb downstream 500 false chr7: 48327070-48327569 Medicago truncatula
Medtr7g117050 1.0kb upstream 1.0kb upstream 5925 true chr7: 48327570-48333494 Medicago truncatula
Medtr7g117050 1.0kb upstream 1.0kb upstream 1000 false chr7: 48332495-48333494 Medicago truncatula
Medtr7g117050 1.0kb downstream 1.0kb downstream 5925 true chr7: 48326570-48332494 Medicago truncatula
Medtr7g117050 1.0kb downstream 1.0kb downstream 1000 false chr7: 48326570-48327569 Medicago truncatula
Medtr7g117050 2.0kb upstream 2.0kb upstream 6925 true chr7: 48327570-48334494 Medicago truncatula
Medtr7g117050 2.0kb upstream 2.0kb upstream 2000 false chr7: 48332495-48334494 Medicago truncatula
Medtr7g117050 2.0kb downstream 2.0kb downstream 6925 true chr7: 48325570-48332494 Medicago truncatula
Medtr7g117050 2.0kb downstream 2.0kb downstream 2000 false chr7: 48325570-48327569 Medicago truncatula
Medtr7g117050 5.0kb upstream 5.0kb upstream 9925 true chr7: 48327570-48337494 Medicago truncatula
Medtr7g117050 5.0kb upstream 5.0kb upstream 5000 false chr7: 48332495-48337494 Medicago truncatula
Medtr7g117050 5.0kb downstream 5.0kb downstream 9925 true chr7: 48322570-48332494 Medicago truncatula
Medtr7g117050 5.0kb downstream 5.0kb downstream 5000 false chr7: 48322570-48327569 Medicago truncatula
Medtr7g117050 10.0kb upstream 10.0kb upstream 14925 true chr7: 48327570-48342494 Medicago truncatula
Medtr7g117050 10.0kb upstream 10.0kb upstream 10000 false chr7: 48332495-48342494 Medicago truncatula
Medtr7g117050 10.0kb downstream 10.0kb downstream 14925 true chr7: 48317570-48332494 Medicago truncatula
Medtr7g117050 10.0kb downstream 10.0kb downstream 10000 false chr7: 48317570-48327569 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299558 5265 Fabidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.162        
cufflinks 2.142        
cufflinks 1.634        
cufflinks 1.426        
cufflinks 2.894        
cufflinks 1.051       Low
cufflinks 2.593        
cufflinks 1.709        
cufflinks 5.152       High

0 Strain