Gene : Medtr7g117920 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF00006//PF02874 - ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) // ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) Description:  ATP synthase subunit beta
Genomic Order:  6170 Name:  ? Medtr7g117920
Secondary Identifier:  ? PAC:31080324
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6126 Medicago truncatula pathologic  
Mtruncatula PWY-7219 Medicago truncatula pathologic  
Mtruncatula PWY-7229 Medicago truncatula pathologic  
Mtruncatula PWY-841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g117920 0.5kb upstream 0.5kb upstream 1451 true chr7: 48938159-48939609 Medicago truncatula
Medtr7g117920 0.5kb upstream 0.5kb upstream 500 false chr7: 48939110-48939609 Medicago truncatula
Medtr7g117920 0.5kb downstream 0.5kb downstream 1451 true chr7: 48937659-48939109 Medicago truncatula
Medtr7g117920 0.5kb downstream 0.5kb downstream 500 false chr7: 48937659-48938158 Medicago truncatula
Medtr7g117920 1.0kb upstream 1.0kb upstream 1951 true chr7: 48938159-48940109 Medicago truncatula
Medtr7g117920 1.0kb upstream 1.0kb upstream 1000 false chr7: 48939110-48940109 Medicago truncatula
Medtr7g117920 1.0kb downstream 1.0kb downstream 1951 true chr7: 48937159-48939109 Medicago truncatula
Medtr7g117920 1.0kb downstream 1.0kb downstream 1000 false chr7: 48937159-48938158 Medicago truncatula
Medtr7g117920 2.0kb upstream 2.0kb upstream 2951 true chr7: 48938159-48941109 Medicago truncatula
Medtr7g117920 2.0kb upstream 2.0kb upstream 2000 false chr7: 48939110-48941109 Medicago truncatula
Medtr7g117920 2.0kb downstream 2.0kb downstream 2951 true chr7: 48936159-48939109 Medicago truncatula
Medtr7g117920 2.0kb downstream 2.0kb downstream 2000 false chr7: 48936159-48938158 Medicago truncatula
Medtr7g117920 5.0kb upstream 5.0kb upstream 5951 true chr7: 48938159-48944109 Medicago truncatula
Medtr7g117920 5.0kb upstream 5.0kb upstream 5000 false chr7: 48939110-48944109 Medicago truncatula
Medtr7g117920 5.0kb downstream 5.0kb downstream 5951 true chr7: 48933159-48939109 Medicago truncatula
Medtr7g117920 5.0kb downstream 5.0kb downstream 5000 false chr7: 48933159-48938158 Medicago truncatula
Medtr7g117920 10.0kb upstream 10.0kb upstream 10951 true chr7: 48938159-48949109 Medicago truncatula
Medtr7g117920 10.0kb upstream 10.0kb upstream 10000 false chr7: 48939110-48949109 Medicago truncatula
Medtr7g117920 10.0kb downstream 10.0kb downstream 10951 true chr7: 48928159-48939109 Medicago truncatula
Medtr7g117920 10.0kb downstream 10.0kb downstream 10000 false chr7: 48928159-48938158 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316303 5265 Fabidae View MSA
124072402 5270 Rosid View MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain