Gene : Medtr7g117675 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10245//PTHR10245:SF33 - ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 Description:  DNA-binding helix turn-helix protein
Genomic Order:  6152 Name:  ? Medtr7g117675
Secondary Identifier:  ? PAC:31077613
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g117675 0.5kb upstream 0.5kb upstream 987 true chr7: 48845627-48846613 Medicago truncatula
Medtr7g117675 0.5kb upstream 0.5kb upstream 500 false chr7: 48846114-48846613 Medicago truncatula
Medtr7g117675 0.5kb downstream 0.5kb downstream 987 true chr7: 48845127-48846113 Medicago truncatula
Medtr7g117675 0.5kb downstream 0.5kb downstream 500 false chr7: 48845127-48845626 Medicago truncatula
Medtr7g117675 1.0kb upstream 1.0kb upstream 1487 true chr7: 48845627-48847113 Medicago truncatula
Medtr7g117675 1.0kb upstream 1.0kb upstream 1000 false chr7: 48846114-48847113 Medicago truncatula
Medtr7g117675 1.0kb downstream 1.0kb downstream 1487 true chr7: 48844627-48846113 Medicago truncatula
Medtr7g117675 1.0kb downstream 1.0kb downstream 1000 false chr7: 48844627-48845626 Medicago truncatula
Medtr7g117675 2.0kb upstream 2.0kb upstream 2487 true chr7: 48845627-48848113 Medicago truncatula
Medtr7g117675 2.0kb upstream 2.0kb upstream 2000 false chr7: 48846114-48848113 Medicago truncatula
Medtr7g117675 2.0kb downstream 2.0kb downstream 2487 true chr7: 48843627-48846113 Medicago truncatula
Medtr7g117675 2.0kb downstream 2.0kb downstream 2000 false chr7: 48843627-48845626 Medicago truncatula
Medtr7g117675 5.0kb upstream 5.0kb upstream 5487 true chr7: 48845627-48851113 Medicago truncatula
Medtr7g117675 5.0kb upstream 5.0kb upstream 5000 false chr7: 48846114-48851113 Medicago truncatula
Medtr7g117675 5.0kb downstream 5.0kb downstream 5487 true chr7: 48840627-48846113 Medicago truncatula
Medtr7g117675 5.0kb downstream 5.0kb downstream 5000 false chr7: 48840627-48845626 Medicago truncatula
Medtr7g117675 10.0kb upstream 10.0kb upstream 10487 true chr7: 48845627-48856113 Medicago truncatula
Medtr7g117675 10.0kb upstream 10.0kb upstream 10000 false chr7: 48846114-48856113 Medicago truncatula
Medtr7g117675 10.0kb downstream 10.0kb downstream 10487 true chr7: 48835627-48846113 Medicago truncatula
Medtr7g117675 10.0kb downstream 10.0kb downstream 10000 false chr7: 48835627-48845626 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657206 5273 Angiosperm View MSA
122266520 5265 Fabidae Singleton cluster - no MSA
124038620 5270 Rosid View MSA
123610901 5271 Pentapetalae View MSA
122645490 5272 Eudicot View MSA
120929251 5274 Embryophyte View MSA
122969820 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.172        
cufflinks 0.163        
cufflinks 0.403       High
cufflinks 0.377       High
cufflinks 0.209        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.137        
cufflinks 0.098        
cufflinks 0.062     Low Low

0 Strain