Gene : Medtr7g406860 M. truncatula Mt4.0v1

Defline:  (1 of 6) 1.1.1.54//1.3.1.102//1.3.1.74 - 2-alkenal reductase (NADP(+)) / NADPH-dependent alkenal/one oxidoreductase // 2-alkenal reductase (NAD(P)(+)) / NADPH:2-alkenal alpha,beta-hydrogenase Description:  NADP-dependent alkenal double bond reductase
Genomic Order:  106 Name:  ? Medtr7g406860
Secondary Identifier:  ? PAC:31078287

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6786 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g406860 0.5kb upstream 0.5kb upstream 3796 true chr7: 944324-948119 Medicago truncatula
Medtr7g406860 0.5kb upstream 0.5kb upstream 500 false chr7: 947620-948119 Medicago truncatula
Medtr7g406860 0.5kb downstream 0.5kb downstream 3796 true chr7: 943824-947619 Medicago truncatula
Medtr7g406860 0.5kb downstream 0.5kb downstream 500 false chr7: 943824-944323 Medicago truncatula
Medtr7g406860 1.0kb upstream 1.0kb upstream 4296 true chr7: 944324-948619 Medicago truncatula
Medtr7g406860 1.0kb upstream 1.0kb upstream 1000 false chr7: 947620-948619 Medicago truncatula
Medtr7g406860 1.0kb downstream 1.0kb downstream 4296 true chr7: 943324-947619 Medicago truncatula
Medtr7g406860 1.0kb downstream 1.0kb downstream 1000 false chr7: 943324-944323 Medicago truncatula
Medtr7g406860 2.0kb upstream 2.0kb upstream 5296 true chr7: 944324-949619 Medicago truncatula
Medtr7g406860 2.0kb upstream 2.0kb upstream 2000 false chr7: 947620-949619 Medicago truncatula
Medtr7g406860 2.0kb downstream 2.0kb downstream 5296 true chr7: 942324-947619 Medicago truncatula
Medtr7g406860 2.0kb downstream 2.0kb downstream 2000 false chr7: 942324-944323 Medicago truncatula
Medtr7g406860 5.0kb upstream 5.0kb upstream 8296 true chr7: 944324-952619 Medicago truncatula
Medtr7g406860 5.0kb upstream 5.0kb upstream 5000 false chr7: 947620-952619 Medicago truncatula
Medtr7g406860 5.0kb downstream 5.0kb downstream 8296 true chr7: 939324-947619 Medicago truncatula
Medtr7g406860 5.0kb downstream 5.0kb downstream 5000 false chr7: 939324-944323 Medicago truncatula
Medtr7g406860 10.0kb upstream 10.0kb upstream 13296 true chr7: 944324-957619 Medicago truncatula
Medtr7g406860 10.0kb upstream 10.0kb upstream 10000 false chr7: 947620-957619 Medicago truncatula
Medtr7g406860 10.0kb downstream 10.0kb downstream 13296 true chr7: 934324-947619 Medicago truncatula
Medtr7g406860 10.0kb downstream 10.0kb downstream 10000 false chr7: 934324-944323 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300538 5265 Fabidae View MSA
124065367 5270 Rosid View MSA
123739652 5271 Pentapetalae View MSA
122790744 5272 Eudicot View MSA
122046784 5273 Angiosperm View MSA
121350474 5274 Embryophyte View MSA
123428381 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.626        
cufflinks 4.204        
cufflinks 5.164        
cufflinks 2.727        
cufflinks 5.497       High
cufflinks 0.895       Low
cufflinks 2.178        
cufflinks 3.678        
cufflinks 2.159        

0 Strain