Gene : Medtr8g007345 M. truncatula Mt4.0v1

Defline:  (1 of 1) 2.4.1.260 - Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichol alpha-1,6-mannosyltransferase / Dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl alpha-6-mannosyltransferase Description:  Alg9-like mannosyltransferase family protein
Genomic Order:  185 Name:  ? Medtr8g007345
Secondary Identifier:  ? PAC:31072446

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g007345 0.5kb upstream 0.5kb upstream 9875   true chr8: 1469857-1479731 Medicago truncatula
Medtr8g007345 0.5kb upstream 0.5kb upstream 500   false chr8: 1469857-1470356 Medicago truncatula
Medtr8g007345 0.5kb downstream 0.5kb downstream 9875   true chr8: 1470357-1480231 Medicago truncatula
Medtr8g007345 0.5kb downstream 0.5kb downstream 500   false chr8: 1479732-1480231 Medicago truncatula
Medtr8g007345 1.0kb upstream 1.0kb upstream 10375   true chr8: 1469357-1479731 Medicago truncatula
Medtr8g007345 1.0kb upstream 1.0kb upstream 1000   false chr8: 1469357-1470356 Medicago truncatula
Medtr8g007345 1.0kb downstream 1.0kb downstream 10375   true chr8: 1470357-1480731 Medicago truncatula
Medtr8g007345 1.0kb downstream 1.0kb downstream 1000   false chr8: 1479732-1480731 Medicago truncatula
Medtr8g007345 2.0kb upstream 2.0kb upstream 11375   true chr8: 1468357-1479731 Medicago truncatula
Medtr8g007345 2.0kb upstream 2.0kb upstream 2000   false chr8: 1468357-1470356 Medicago truncatula
Medtr8g007345 2.0kb downstream 2.0kb downstream 11375   true chr8: 1470357-1481731 Medicago truncatula
Medtr8g007345 2.0kb downstream 2.0kb downstream 2000   false chr8: 1479732-1481731 Medicago truncatula
Medtr8g007345 5.0kb upstream 5.0kb upstream 14375   true chr8: 1465357-1479731 Medicago truncatula
Medtr8g007345 5.0kb upstream 5.0kb upstream 5000   false chr8: 1465357-1470356 Medicago truncatula
Medtr8g007345 5.0kb downstream 5.0kb downstream 14375   true chr8: 1470357-1484731 Medicago truncatula
Medtr8g007345 5.0kb downstream 5.0kb downstream 5000   false chr8: 1479732-1484731 Medicago truncatula
Medtr8g007345 10.0kb upstream 10.0kb upstream 19375   true chr8: 1460357-1479731 Medicago truncatula
Medtr8g007345 10.0kb upstream 10.0kb upstream 10000   false chr8: 1460357-1470356 Medicago truncatula
Medtr8g007345 10.0kb downstream 10.0kb downstream 19375   true chr8: 1470357-1489731 Medicago truncatula
Medtr8g007345 10.0kb downstream 10.0kb downstream 10000   false chr8: 1479732-1489731 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300504 5265 Fabidae View MSA
124065105 5270 Rosid View MSA
123738429 5271 Pentapetalae View MSA
122789475 5272 Eudicot View MSA
122046384 5273 Angiosperm View MSA
121345023 5274 Embryophyte View MSA
123424059 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.173        
cufflinks 0.339       High
cufflinks 0.25        
cufflinks 0.069       Low
cufflinks 0.372       High
cufflinks 0.059     Low Low
cufflinks 0.205        
cufflinks 0.205        
cufflinks 0.167        

0 Strain