Gene : Medtr8g007390 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24012:SF493 - RNA-BINDING PROTEIN 28 Description:  heterogeneous nuclear ribonucleoprotein
Genomic Order:  194 Name:  ? Medtr8g007390
Secondary Identifier:  ? PAC:31075456
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g007390 0.5kb upstream 0.5kb upstream 4856   true chr8: 1506382-1511237 Medicago truncatula
Medtr8g007390 0.5kb upstream 0.5kb upstream 500   false chr8: 1510738-1511237 Medicago truncatula
Medtr8g007390 0.5kb downstream 0.5kb downstream 4856   true chr8: 1505882-1510737 Medicago truncatula
Medtr8g007390 0.5kb downstream 0.5kb downstream 500   false chr8: 1505882-1506381 Medicago truncatula
Medtr8g007390 1.0kb upstream 1.0kb upstream 5356   true chr8: 1506382-1511737 Medicago truncatula
Medtr8g007390 1.0kb upstream 1.0kb upstream 1000   false chr8: 1510738-1511737 Medicago truncatula
Medtr8g007390 1.0kb downstream 1.0kb downstream 5356   true chr8: 1505382-1510737 Medicago truncatula
Medtr8g007390 1.0kb downstream 1.0kb downstream 1000   false chr8: 1505382-1506381 Medicago truncatula
Medtr8g007390 2.0kb upstream 2.0kb upstream 6356   true chr8: 1506382-1512737 Medicago truncatula
Medtr8g007390 2.0kb upstream 2.0kb upstream 2000   false chr8: 1510738-1512737 Medicago truncatula
Medtr8g007390 2.0kb downstream 2.0kb downstream 6356   true chr8: 1504382-1510737 Medicago truncatula
Medtr8g007390 2.0kb downstream 2.0kb downstream 2000   false chr8: 1504382-1506381 Medicago truncatula
Medtr8g007390 5.0kb upstream 5.0kb upstream 9356   true chr8: 1506382-1515737 Medicago truncatula
Medtr8g007390 5.0kb upstream 5.0kb upstream 5000   false chr8: 1510738-1515737 Medicago truncatula
Medtr8g007390 5.0kb downstream 5.0kb downstream 9356   true chr8: 1501382-1510737 Medicago truncatula
Medtr8g007390 5.0kb downstream 5.0kb downstream 5000   false chr8: 1501382-1506381 Medicago truncatula
Medtr8g007390 10.0kb upstream 10.0kb upstream 14356   true chr8: 1506382-1520737 Medicago truncatula
Medtr8g007390 10.0kb upstream 10.0kb upstream 10000   false chr8: 1510738-1520737 Medicago truncatula
Medtr8g007390 10.0kb downstream 10.0kb downstream 14356   true chr8: 1496382-1510737 Medicago truncatula
Medtr8g007390 10.0kb downstream 10.0kb downstream 10000   false chr8: 1496382-1506381 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041174 5273 Angiosperm View MSA
122303901 5265 Fabidae View MSA
124068626 5270 Rosid View MSA
123750453 5271 Pentapetalae View MSA
122797248 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349565 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.048       High
cufflinks 2.581        
cufflinks 2.572        
cufflinks 1.875        
cufflinks 3.207        
cufflinks 1.247       Low
cufflinks 2.241        
cufflinks 2.665        
cufflinks 2.571        

0 Strain