Gene : Medtr7g112460 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Description:  topless-like protein
Genomic Order:  5768 Name:  ? Medtr7g112460
Secondary Identifier:  ? PAC:31081496
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g112460 0.5kb upstream 0.5kb upstream 9073 true chr7: 46233077-46242149 Medicago truncatula
Medtr7g112460 0.5kb upstream 0.5kb upstream 500 false chr7: 46241650-46242149 Medicago truncatula
Medtr7g112460 0.5kb downstream 0.5kb downstream 9073 true chr7: 46232577-46241649 Medicago truncatula
Medtr7g112460 0.5kb downstream 0.5kb downstream 500 false chr7: 46232577-46233076 Medicago truncatula
Medtr7g112460 1.0kb upstream 1.0kb upstream 9573 true chr7: 46233077-46242649 Medicago truncatula
Medtr7g112460 1.0kb upstream 1.0kb upstream 1000 false chr7: 46241650-46242649 Medicago truncatula
Medtr7g112460 1.0kb downstream 1.0kb downstream 9573 true chr7: 46232077-46241649 Medicago truncatula
Medtr7g112460 1.0kb downstream 1.0kb downstream 1000 false chr7: 46232077-46233076 Medicago truncatula
Medtr7g112460 2.0kb upstream 2.0kb upstream 10573 true chr7: 46233077-46243649 Medicago truncatula
Medtr7g112460 2.0kb upstream 2.0kb upstream 2000 false chr7: 46241650-46243649 Medicago truncatula
Medtr7g112460 2.0kb downstream 2.0kb downstream 10573 true chr7: 46231077-46241649 Medicago truncatula
Medtr7g112460 2.0kb downstream 2.0kb downstream 2000 false chr7: 46231077-46233076 Medicago truncatula
Medtr7g112460 5.0kb upstream 5.0kb upstream 13573 true chr7: 46233077-46246649 Medicago truncatula
Medtr7g112460 5.0kb upstream 5.0kb upstream 5000 false chr7: 46241650-46246649 Medicago truncatula
Medtr7g112460 5.0kb downstream 5.0kb downstream 13573 true chr7: 46228077-46241649 Medicago truncatula
Medtr7g112460 5.0kb downstream 5.0kb downstream 5000 false chr7: 46228077-46233076 Medicago truncatula
Medtr7g112460 10.0kb upstream 10.0kb upstream 18573 true chr7: 46233077-46251649 Medicago truncatula
Medtr7g112460 10.0kb upstream 10.0kb upstream 10000 false chr7: 46241650-46251649 Medicago truncatula
Medtr7g112460 10.0kb downstream 10.0kb downstream 18573 true chr7: 46223077-46241649 Medicago truncatula
Medtr7g112460 10.0kb downstream 10.0kb downstream 10000 false chr7: 46223077-46233076 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026551 5273 Angiosperm View MSA
122313709 5265 Fabidae View MSA
124065590 5270 Rosid View MSA
123741306 5271 Pentapetalae View MSA
122793057 5272 Eudicot View MSA
121296383 5274 Embryophyte View MSA
123334555 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.555     High  
cufflinks 12.01     High  
cufflinks 22.473     High High
cufflinks 15.933     High  
cufflinks 15.197     High  
cufflinks 6.364       Low
cufflinks 20.761     High  
cufflinks 14.132     High  
cufflinks 18.451     High  

0 Strain