Gene : Medtr7g113180 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10688 - PWWP DOMAIN-CONTAINING PROTEIN Description:  tudor/PWWP/MBT superfamily protein
Genomic Order:  5823 Name:  ? Medtr7g113180
Secondary Identifier:  ? PAC:31081391
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g113180 0.5kb upstream 0.5kb upstream 5419 true chr7: 46591846-46597264 Medicago truncatula
Medtr7g113180 0.5kb upstream 0.5kb upstream 500 false chr7: 46596765-46597264 Medicago truncatula
Medtr7g113180 0.5kb downstream 0.5kb downstream 5419 true chr7: 46591346-46596764 Medicago truncatula
Medtr7g113180 0.5kb downstream 0.5kb downstream 500 false chr7: 46591346-46591845 Medicago truncatula
Medtr7g113180 1.0kb upstream 1.0kb upstream 5919 true chr7: 46591846-46597764 Medicago truncatula
Medtr7g113180 1.0kb upstream 1.0kb upstream 1000 false chr7: 46596765-46597764 Medicago truncatula
Medtr7g113180 1.0kb downstream 1.0kb downstream 5919 true chr7: 46590846-46596764 Medicago truncatula
Medtr7g113180 1.0kb downstream 1.0kb downstream 1000 false chr7: 46590846-46591845 Medicago truncatula
Medtr7g113180 2.0kb upstream 2.0kb upstream 6919 true chr7: 46591846-46598764 Medicago truncatula
Medtr7g113180 2.0kb upstream 2.0kb upstream 2000 false chr7: 46596765-46598764 Medicago truncatula
Medtr7g113180 2.0kb downstream 2.0kb downstream 6919 true chr7: 46589846-46596764 Medicago truncatula
Medtr7g113180 2.0kb downstream 2.0kb downstream 2000 false chr7: 46589846-46591845 Medicago truncatula
Medtr7g113180 5.0kb upstream 5.0kb upstream 9919 true chr7: 46591846-46601764 Medicago truncatula
Medtr7g113180 5.0kb upstream 5.0kb upstream 5000 false chr7: 46596765-46601764 Medicago truncatula
Medtr7g113180 5.0kb downstream 5.0kb downstream 9919 true chr7: 46586846-46596764 Medicago truncatula
Medtr7g113180 5.0kb downstream 5.0kb downstream 5000 false chr7: 46586846-46591845 Medicago truncatula
Medtr7g113180 10.0kb upstream 10.0kb upstream 14919 true chr7: 46591846-46606764 Medicago truncatula
Medtr7g113180 10.0kb upstream 10.0kb upstream 10000 false chr7: 46596765-46606764 Medicago truncatula
Medtr7g113180 10.0kb downstream 10.0kb downstream 14919 true chr7: 46581846-46596764 Medicago truncatula
Medtr7g113180 10.0kb downstream 10.0kb downstream 10000 false chr7: 46581846-46591845 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302588 5265 Fabidae View MSA
124067210 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.494        
cufflinks 7.282        
cufflinks 12.674     High High
cufflinks 6.566        
cufflinks 8.395        
cufflinks 2.819       Low
cufflinks 6.638        
cufflinks 10.638     High  
cufflinks 5.85        

0 Strain