Gene : Medtr7g113130 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11972:SF57 - RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN B Description:  respiratory burst oxidase-like protein
Genomic Order:  5820 Name:  ? Medtr7g113130
Secondary Identifier:  ? PAC:31078779
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g113130 0.5kb upstream 0.5kb upstream 7400 true chr7: 46559629-46567028 Medicago truncatula
Medtr7g113130 0.5kb upstream 0.5kb upstream 500 false chr7: 46566529-46567028 Medicago truncatula
Medtr7g113130 0.5kb downstream 0.5kb downstream 7400 true chr7: 46559129-46566528 Medicago truncatula
Medtr7g113130 0.5kb downstream 0.5kb downstream 500 false chr7: 46559129-46559628 Medicago truncatula
Medtr7g113130 1.0kb upstream 1.0kb upstream 7900 true chr7: 46559629-46567528 Medicago truncatula
Medtr7g113130 1.0kb upstream 1.0kb upstream 1000 false chr7: 46566529-46567528 Medicago truncatula
Medtr7g113130 1.0kb downstream 1.0kb downstream 7900 true chr7: 46558629-46566528 Medicago truncatula
Medtr7g113130 1.0kb downstream 1.0kb downstream 1000 false chr7: 46558629-46559628 Medicago truncatula
Medtr7g113130 2.0kb upstream 2.0kb upstream 8900 true chr7: 46559629-46568528 Medicago truncatula
Medtr7g113130 2.0kb upstream 2.0kb upstream 2000 false chr7: 46566529-46568528 Medicago truncatula
Medtr7g113130 2.0kb downstream 2.0kb downstream 8900 true chr7: 46557629-46566528 Medicago truncatula
Medtr7g113130 2.0kb downstream 2.0kb downstream 2000 false chr7: 46557629-46559628 Medicago truncatula
Medtr7g113130 5.0kb upstream 5.0kb upstream 11900 true chr7: 46559629-46571528 Medicago truncatula
Medtr7g113130 5.0kb upstream 5.0kb upstream 5000 false chr7: 46566529-46571528 Medicago truncatula
Medtr7g113130 5.0kb downstream 5.0kb downstream 11900 true chr7: 46554629-46566528 Medicago truncatula
Medtr7g113130 5.0kb downstream 5.0kb downstream 5000 false chr7: 46554629-46559628 Medicago truncatula
Medtr7g113130 10.0kb upstream 10.0kb upstream 16900 true chr7: 46559629-46576528 Medicago truncatula
Medtr7g113130 10.0kb upstream 10.0kb upstream 10000 false chr7: 46566529-46576528 Medicago truncatula
Medtr7g113130 10.0kb downstream 10.0kb downstream 16900 true chr7: 46549629-46566528 Medicago truncatula
Medtr7g113130 10.0kb downstream 10.0kb downstream 10000 false chr7: 46549629-46559628 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310084 5265 Fabidae View MSA
124069385 5270 Rosid View MSA
123751204 5271 Pentapetalae View MSA
122794480 5272 Eudicot View MSA
122044435 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.298     High High
cufflinks 7.142        
cufflinks 10.999     High  
cufflinks 7.878        
cufflinks 7.235        
cufflinks 16.35     High  
cufflinks 36.014     High High
cufflinks 5.773       Low
cufflinks 21.508     High  

0 Strain