Gene : Medtr7g113620 M. truncatula Mt4.0v1
Defline:  (1 of 3) KOG3114 - Uncharacterized conserved protein Description:  integral membrane Yip1-family protein
Genomic Order:  5858 Name:  ? Medtr7g113620
Secondary Identifier:  ? PAC:31083147
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g113620 0.5kb upstream 0.5kb upstream 4386 true chr7: 46823662-46828047 Medicago truncatula
Medtr7g113620 0.5kb upstream 0.5kb upstream 500 false chr7: 46823662-46824161 Medicago truncatula
Medtr7g113620 0.5kb downstream 0.5kb downstream 4386 true chr7: 46824162-46828547 Medicago truncatula
Medtr7g113620 0.5kb downstream 0.5kb downstream 500 false chr7: 46828048-46828547 Medicago truncatula
Medtr7g113620 1.0kb upstream 1.0kb upstream 4886 true chr7: 46823162-46828047 Medicago truncatula
Medtr7g113620 1.0kb upstream 1.0kb upstream 1000 false chr7: 46823162-46824161 Medicago truncatula
Medtr7g113620 1.0kb downstream 1.0kb downstream 4886 true chr7: 46824162-46829047 Medicago truncatula
Medtr7g113620 1.0kb downstream 1.0kb downstream 1000 false chr7: 46828048-46829047 Medicago truncatula
Medtr7g113620 2.0kb upstream 2.0kb upstream 5886 true chr7: 46822162-46828047 Medicago truncatula
Medtr7g113620 2.0kb upstream 2.0kb upstream 2000 false chr7: 46822162-46824161 Medicago truncatula
Medtr7g113620 2.0kb downstream 2.0kb downstream 5886 true chr7: 46824162-46830047 Medicago truncatula
Medtr7g113620 2.0kb downstream 2.0kb downstream 2000 false chr7: 46828048-46830047 Medicago truncatula
Medtr7g113620 5.0kb upstream 5.0kb upstream 8886 true chr7: 46819162-46828047 Medicago truncatula
Medtr7g113620 5.0kb upstream 5.0kb upstream 5000 false chr7: 46819162-46824161 Medicago truncatula
Medtr7g113620 5.0kb downstream 5.0kb downstream 8886 true chr7: 46824162-46833047 Medicago truncatula
Medtr7g113620 5.0kb downstream 5.0kb downstream 5000 false chr7: 46828048-46833047 Medicago truncatula
Medtr7g113620 10.0kb upstream 10.0kb upstream 13886 true chr7: 46814162-46828047 Medicago truncatula
Medtr7g113620 10.0kb upstream 10.0kb upstream 10000 false chr7: 46814162-46824161 Medicago truncatula
Medtr7g113620 10.0kb downstream 10.0kb downstream 13886 true chr7: 46824162-46838047 Medicago truncatula
Medtr7g113620 10.0kb downstream 10.0kb downstream 10000 false chr7: 46828048-46838047 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306811 5265 Fabidae View MSA
124062675 5270 Rosid View MSA
123739303 5271 Pentapetalae View MSA
122790193 5272 Eudicot View MSA
122045240 5273 Angiosperm View MSA
121344088 5274 Embryophyte View MSA
123427303 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.769        
cufflinks 7.638        
cufflinks 5.573        
cufflinks 6.352        
cufflinks 8.313        
cufflinks 5.073       Low
cufflinks 8.165        
cufflinks 4.647       Low
cufflinks 8.573       High

0 Strain