Gene : Medtr7g114100 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG1327 - Copine Description:  calcium-dependent phospholipid-binding copine family protein
Genomic Order:  5897 Name:  ? Medtr7g114100
Secondary Identifier:  ? PAC:31080216
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g114100 0.5kb upstream 0.5kb upstream 4830 true chr7: 47054450-47059279 Medicago truncatula
Medtr7g114100 0.5kb upstream 0.5kb upstream 500 false chr7: 47058780-47059279 Medicago truncatula
Medtr7g114100 0.5kb downstream 0.5kb downstream 4830 true chr7: 47053950-47058779 Medicago truncatula
Medtr7g114100 0.5kb downstream 0.5kb downstream 500 false chr7: 47053950-47054449 Medicago truncatula
Medtr7g114100 1.0kb upstream 1.0kb upstream 5330 true chr7: 47054450-47059779 Medicago truncatula
Medtr7g114100 1.0kb upstream 1.0kb upstream 1000 false chr7: 47058780-47059779 Medicago truncatula
Medtr7g114100 1.0kb downstream 1.0kb downstream 5330 true chr7: 47053450-47058779 Medicago truncatula
Medtr7g114100 1.0kb downstream 1.0kb downstream 1000 false chr7: 47053450-47054449 Medicago truncatula
Medtr7g114100 2.0kb upstream 2.0kb upstream 6330 true chr7: 47054450-47060779 Medicago truncatula
Medtr7g114100 2.0kb upstream 2.0kb upstream 2000 false chr7: 47058780-47060779 Medicago truncatula
Medtr7g114100 2.0kb downstream 2.0kb downstream 6330 true chr7: 47052450-47058779 Medicago truncatula
Medtr7g114100 2.0kb downstream 2.0kb downstream 2000 false chr7: 47052450-47054449 Medicago truncatula
Medtr7g114100 5.0kb upstream 5.0kb upstream 9330 true chr7: 47054450-47063779 Medicago truncatula
Medtr7g114100 5.0kb upstream 5.0kb upstream 5000 false chr7: 47058780-47063779 Medicago truncatula
Medtr7g114100 5.0kb downstream 5.0kb downstream 9330 true chr7: 47049450-47058779 Medicago truncatula
Medtr7g114100 5.0kb downstream 5.0kb downstream 5000 false chr7: 47049450-47054449 Medicago truncatula
Medtr7g114100 10.0kb upstream 10.0kb upstream 14330 true chr7: 47054450-47068779 Medicago truncatula
Medtr7g114100 10.0kb upstream 10.0kb upstream 10000 false chr7: 47058780-47068779 Medicago truncatula
Medtr7g114100 10.0kb downstream 10.0kb downstream 14330 true chr7: 47044450-47058779 Medicago truncatula
Medtr7g114100 10.0kb downstream 10.0kb downstream 10000 false chr7: 47044450-47054449 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781508 5273 Angiosperm View MSA
122773325 5272 Eudicot View MSA
122267189 5265 Fabidae Singleton cluster - no MSA
124041125 5270 Rosid View MSA
123749806 5271 Pentapetalae View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.625       High
cufflinks 0.003     Low  
cufflinks 0.007     Low  
cufflinks 0.005     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.005     Low  
cufflinks 0.015     Low  

0 Strain