Gene : Medtr7g108730 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR14150 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 Description:  U3 small nucleolar RNA-associated-like protein
Genomic Order:  5510 Name:  ? Medtr7g108730
Secondary Identifier:  ? PAC:31083199
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g108730 0.5kb upstream 0.5kb upstream 8134 true chr7: 44364422-44372555 Medicago truncatula
Medtr7g108730 0.5kb upstream 0.5kb upstream 500 false chr7: 44372056-44372555 Medicago truncatula
Medtr7g108730 0.5kb downstream 0.5kb downstream 8134 true chr7: 44363922-44372055 Medicago truncatula
Medtr7g108730 0.5kb downstream 0.5kb downstream 500 false chr7: 44363922-44364421 Medicago truncatula
Medtr7g108730 1.0kb upstream 1.0kb upstream 8634 true chr7: 44364422-44373055 Medicago truncatula
Medtr7g108730 1.0kb upstream 1.0kb upstream 1000 false chr7: 44372056-44373055 Medicago truncatula
Medtr7g108730 1.0kb downstream 1.0kb downstream 8634 true chr7: 44363422-44372055 Medicago truncatula
Medtr7g108730 1.0kb downstream 1.0kb downstream 1000 false chr7: 44363422-44364421 Medicago truncatula
Medtr7g108730 2.0kb upstream 2.0kb upstream 9634 true chr7: 44364422-44374055 Medicago truncatula
Medtr7g108730 2.0kb upstream 2.0kb upstream 2000 false chr7: 44372056-44374055 Medicago truncatula
Medtr7g108730 2.0kb downstream 2.0kb downstream 9634 true chr7: 44362422-44372055 Medicago truncatula
Medtr7g108730 2.0kb downstream 2.0kb downstream 2000 false chr7: 44362422-44364421 Medicago truncatula
Medtr7g108730 5.0kb upstream 5.0kb upstream 12634 true chr7: 44364422-44377055 Medicago truncatula
Medtr7g108730 5.0kb upstream 5.0kb upstream 5000 false chr7: 44372056-44377055 Medicago truncatula
Medtr7g108730 5.0kb downstream 5.0kb downstream 12634 true chr7: 44359422-44372055 Medicago truncatula
Medtr7g108730 5.0kb downstream 5.0kb downstream 5000 false chr7: 44359422-44364421 Medicago truncatula
Medtr7g108730 10.0kb upstream 10.0kb upstream 17634 true chr7: 44364422-44382055 Medicago truncatula
Medtr7g108730 10.0kb upstream 10.0kb upstream 10000 false chr7: 44372056-44382055 Medicago truncatula
Medtr7g108730 10.0kb downstream 10.0kb downstream 17634 true chr7: 44354422-44372055 Medicago truncatula
Medtr7g108730 10.0kb downstream 10.0kb downstream 10000 false chr7: 44354422-44364421 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301492 5265 Fabidae View MSA
124066027 5270 Rosid View MSA
123741569 5271 Pentapetalae View MSA
122789382 5272 Eudicot View MSA
122043501 5273 Angiosperm View MSA
121349819 5274 Embryophyte View MSA
123425174 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.061        
cufflinks 4.616        
cufflinks 4.431        
cufflinks 1.554       Low
cufflinks 5.429       High
cufflinks 1.941       Low
cufflinks 3.445        
cufflinks 3.988        
cufflinks 2.434        

0 Strain