Gene : Medtr7g108905 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31707:SF25 - PECTINESTERASE/PECTINESTERASE INHIBITOR 39-RELATED Description:  pectinesterase/pectinesterase inhibitor
Genomic Order:  5530 Name:  ? Medtr7g108905
Secondary Identifier:  ? PAC:31082147
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g108905 0.5kb upstream 0.5kb upstream 6104 true chr7: 44492733-44498836 Medicago truncatula
Medtr7g108905 0.5kb upstream 0.5kb upstream 500 false chr7: 44492733-44493232 Medicago truncatula
Medtr7g108905 0.5kb downstream 0.5kb downstream 6104 true chr7: 44493233-44499336 Medicago truncatula
Medtr7g108905 0.5kb downstream 0.5kb downstream 500 false chr7: 44498837-44499336 Medicago truncatula
Medtr7g108905 1.0kb upstream 1.0kb upstream 6604 true chr7: 44492233-44498836 Medicago truncatula
Medtr7g108905 1.0kb upstream 1.0kb upstream 1000 false chr7: 44492233-44493232 Medicago truncatula
Medtr7g108905 1.0kb downstream 1.0kb downstream 6604 true chr7: 44493233-44499836 Medicago truncatula
Medtr7g108905 1.0kb downstream 1.0kb downstream 1000 false chr7: 44498837-44499836 Medicago truncatula
Medtr7g108905 2.0kb upstream 2.0kb upstream 7604 true chr7: 44491233-44498836 Medicago truncatula
Medtr7g108905 2.0kb upstream 2.0kb upstream 2000 false chr7: 44491233-44493232 Medicago truncatula
Medtr7g108905 2.0kb downstream 2.0kb downstream 7604 true chr7: 44493233-44500836 Medicago truncatula
Medtr7g108905 2.0kb downstream 2.0kb downstream 2000 false chr7: 44498837-44500836 Medicago truncatula
Medtr7g108905 5.0kb upstream 5.0kb upstream 10604 true chr7: 44488233-44498836 Medicago truncatula
Medtr7g108905 5.0kb upstream 5.0kb upstream 5000 false chr7: 44488233-44493232 Medicago truncatula
Medtr7g108905 5.0kb downstream 5.0kb downstream 10604 true chr7: 44493233-44503836 Medicago truncatula
Medtr7g108905 5.0kb downstream 5.0kb downstream 5000 false chr7: 44498837-44503836 Medicago truncatula
Medtr7g108905 10.0kb upstream 10.0kb upstream 15604 true chr7: 44483233-44498836 Medicago truncatula
Medtr7g108905 10.0kb upstream 10.0kb upstream 10000 false chr7: 44483233-44493232 Medicago truncatula
Medtr7g108905 10.0kb downstream 10.0kb downstream 15604 true chr7: 44493233-44508836 Medicago truncatula
Medtr7g108905 10.0kb downstream 10.0kb downstream 10000 false chr7: 44498837-44508836 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311201 5265 Fabidae View MSA
124074194 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.249       Low
cufflinks 37.139     High High
cufflinks 16.1     High  
cufflinks 1.287        
cufflinks 27.04     High  
cufflinks 1.003        
cufflinks 2.606        
cufflinks 28.91     High High
cufflinks 3.384        

0 Strain