Gene : Medtr7g111060 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.4.22.1 - Cathepsin B / Cathepsin B1 Description:  cathepsin B-like cysteine protease
Genomic Order:  5676 Name:  ? Medtr7g111060
Secondary Identifier:  ? PAC:31078351
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g111060 0.5kb upstream 0.5kb upstream 5491 true chr7: 45542808-45548298 Medicago truncatula
Medtr7g111060 0.5kb upstream 0.5kb upstream 500 false chr7: 45547799-45548298 Medicago truncatula
Medtr7g111060 0.5kb downstream 0.5kb downstream 5491 true chr7: 45542308-45547798 Medicago truncatula
Medtr7g111060 0.5kb downstream 0.5kb downstream 500 false chr7: 45542308-45542807 Medicago truncatula
Medtr7g111060 1.0kb upstream 1.0kb upstream 5991 true chr7: 45542808-45548798 Medicago truncatula
Medtr7g111060 1.0kb upstream 1.0kb upstream 1000 false chr7: 45547799-45548798 Medicago truncatula
Medtr7g111060 1.0kb downstream 1.0kb downstream 5991 true chr7: 45541808-45547798 Medicago truncatula
Medtr7g111060 1.0kb downstream 1.0kb downstream 1000 false chr7: 45541808-45542807 Medicago truncatula
Medtr7g111060 2.0kb upstream 2.0kb upstream 6991 true chr7: 45542808-45549798 Medicago truncatula
Medtr7g111060 2.0kb upstream 2.0kb upstream 2000 false chr7: 45547799-45549798 Medicago truncatula
Medtr7g111060 2.0kb downstream 2.0kb downstream 6991 true chr7: 45540808-45547798 Medicago truncatula
Medtr7g111060 2.0kb downstream 2.0kb downstream 2000 false chr7: 45540808-45542807 Medicago truncatula
Medtr7g111060 5.0kb upstream 5.0kb upstream 9991 true chr7: 45542808-45552798 Medicago truncatula
Medtr7g111060 5.0kb upstream 5.0kb upstream 5000 false chr7: 45547799-45552798 Medicago truncatula
Medtr7g111060 5.0kb downstream 5.0kb downstream 9991 true chr7: 45537808-45547798 Medicago truncatula
Medtr7g111060 5.0kb downstream 5.0kb downstream 5000 false chr7: 45537808-45542807 Medicago truncatula
Medtr7g111060 10.0kb upstream 10.0kb upstream 14991 true chr7: 45542808-45557798 Medicago truncatula
Medtr7g111060 10.0kb upstream 10.0kb upstream 10000 false chr7: 45547799-45557798 Medicago truncatula
Medtr7g111060 10.0kb downstream 10.0kb downstream 14991 true chr7: 45532808-45547798 Medicago truncatula
Medtr7g111060 10.0kb downstream 10.0kb downstream 10000 false chr7: 45532808-45542807 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308797 5265 Fabidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.358     High  
cufflinks 18.222     High Low
cufflinks 63.347     High High
cufflinks 38.375     High  
cufflinks 24.682     High  
cufflinks 31.826     High  
cufflinks 55.874     High  
cufflinks 29.877     High  
cufflinks 56.512     High  

0 Strain