Gene : Medtr7g111540 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11601//PTHR11601:SF47 - CYSTEINE DESULFURYLASE Description:  isopenicillin N epimerase-like protein
Genomic Order:  5709 Name:  ? Medtr7g111540
Secondary Identifier:  ? PAC:31076973
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g111540 0.5kb upstream 0.5kb upstream 4418 true chr7: 45782671-45787088 Medicago truncatula
Medtr7g111540 0.5kb upstream 0.5kb upstream 500 false chr7: 45782671-45783170 Medicago truncatula
Medtr7g111540 0.5kb downstream 0.5kb downstream 4418 true chr7: 45783171-45787588 Medicago truncatula
Medtr7g111540 0.5kb downstream 0.5kb downstream 500 false chr7: 45787089-45787588 Medicago truncatula
Medtr7g111540 1.0kb upstream 1.0kb upstream 4918 true chr7: 45782171-45787088 Medicago truncatula
Medtr7g111540 1.0kb upstream 1.0kb upstream 1000 false chr7: 45782171-45783170 Medicago truncatula
Medtr7g111540 1.0kb downstream 1.0kb downstream 4918 true chr7: 45783171-45788088 Medicago truncatula
Medtr7g111540 1.0kb downstream 1.0kb downstream 1000 false chr7: 45787089-45788088 Medicago truncatula
Medtr7g111540 2.0kb upstream 2.0kb upstream 5918 true chr7: 45781171-45787088 Medicago truncatula
Medtr7g111540 2.0kb upstream 2.0kb upstream 2000 false chr7: 45781171-45783170 Medicago truncatula
Medtr7g111540 2.0kb downstream 2.0kb downstream 5918 true chr7: 45783171-45789088 Medicago truncatula
Medtr7g111540 2.0kb downstream 2.0kb downstream 2000 false chr7: 45787089-45789088 Medicago truncatula
Medtr7g111540 5.0kb upstream 5.0kb upstream 8918 true chr7: 45778171-45787088 Medicago truncatula
Medtr7g111540 5.0kb upstream 5.0kb upstream 5000 false chr7: 45778171-45783170 Medicago truncatula
Medtr7g111540 5.0kb downstream 5.0kb downstream 8918 true chr7: 45783171-45792088 Medicago truncatula
Medtr7g111540 5.0kb downstream 5.0kb downstream 5000 false chr7: 45787089-45792088 Medicago truncatula
Medtr7g111540 10.0kb upstream 10.0kb upstream 13918 true chr7: 45773171-45787088 Medicago truncatula
Medtr7g111540 10.0kb upstream 10.0kb upstream 10000 false chr7: 45773171-45783170 Medicago truncatula
Medtr7g111540 10.0kb downstream 10.0kb downstream 13918 true chr7: 45783171-45797088 Medicago truncatula
Medtr7g111540 10.0kb downstream 10.0kb downstream 10000 false chr7: 45787089-45797088 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300086 5265 Fabidae View MSA
124063514 5270 Rosid View MSA
123741535 5271 Pentapetalae View MSA
122792322 5272 Eudicot View MSA
122047079 5273 Angiosperm View MSA
121347897 5274 Embryophyte View MSA
123426680 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.412       Low
cufflinks 7.207        
cufflinks 9.138       High
cufflinks 9.152     High High
cufflinks 7.31        
cufflinks 5.613       Low
cufflinks 5.762       Low
cufflinks 7.883        
cufflinks 7.581        

0 Strain