Gene : Medtr7g112140 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2 Description:  haloacid dehalogenase-like hydrolase family protein
Genomic Order:  5752 Name:  ? Medtr7g112140
Secondary Identifier:  ? PAC:31080346
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g112140 0.5kb upstream 0.5kb upstream 18334 true chr7: 46103252-46121585 Medicago truncatula
Medtr7g112140 0.5kb upstream 0.5kb upstream 500 false chr7: 46103252-46103751 Medicago truncatula
Medtr7g112140 0.5kb downstream 0.5kb downstream 18334 true chr7: 46103752-46122085 Medicago truncatula
Medtr7g112140 0.5kb downstream 0.5kb downstream 500 false chr7: 46121586-46122085 Medicago truncatula
Medtr7g112140 1.0kb upstream 1.0kb upstream 18834 true chr7: 46102752-46121585 Medicago truncatula
Medtr7g112140 1.0kb upstream 1.0kb upstream 1000 false chr7: 46102752-46103751 Medicago truncatula
Medtr7g112140 1.0kb downstream 1.0kb downstream 18834 true chr7: 46103752-46122585 Medicago truncatula
Medtr7g112140 1.0kb downstream 1.0kb downstream 1000 false chr7: 46121586-46122585 Medicago truncatula
Medtr7g112140 2.0kb upstream 2.0kb upstream 19834 true chr7: 46101752-46121585 Medicago truncatula
Medtr7g112140 2.0kb upstream 2.0kb upstream 2000 false chr7: 46101752-46103751 Medicago truncatula
Medtr7g112140 2.0kb downstream 2.0kb downstream 19834 true chr7: 46103752-46123585 Medicago truncatula
Medtr7g112140 2.0kb downstream 2.0kb downstream 2000 false chr7: 46121586-46123585 Medicago truncatula
Medtr7g112140 5.0kb upstream 5.0kb upstream 22834 true chr7: 46098752-46121585 Medicago truncatula
Medtr7g112140 5.0kb upstream 5.0kb upstream 5000 false chr7: 46098752-46103751 Medicago truncatula
Medtr7g112140 5.0kb downstream 5.0kb downstream 22834 true chr7: 46103752-46126585 Medicago truncatula
Medtr7g112140 5.0kb downstream 5.0kb downstream 5000 false chr7: 46121586-46126585 Medicago truncatula
Medtr7g112140 10.0kb upstream 10.0kb upstream 27834 true chr7: 46093752-46121585 Medicago truncatula
Medtr7g112140 10.0kb upstream 10.0kb upstream 10000 false chr7: 46093752-46103751 Medicago truncatula
Medtr7g112140 10.0kb downstream 10.0kb downstream 27834 true chr7: 46103752-46131585 Medicago truncatula
Medtr7g112140 10.0kb downstream 10.0kb downstream 10000 false chr7: 46121586-46131585 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307944 5265 Fabidae View MSA
124061821 5270 Rosid View MSA
123738220 5271 Pentapetalae View MSA
122791957 5272 Eudicot View MSA
122045545 5273 Angiosperm View MSA
121344025 5274 Embryophyte View MSA
123424859 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.174        
cufflinks 2.388        
cufflinks 2.096        
cufflinks 0.041     Low Low
cufflinks 2.692       High
cufflinks 0.027     Low Low
cufflinks 0.142        
cufflinks 2.642       High
cufflinks 0.078     Low  

0 Strain