Gene : Medtr7g104930 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10553//PTHR10553:SF9 - SMALL NUCLEAR RIBONUCLEOPROTEIN Description:  small nuclear ribonucleoprotein
Genomic Order:  5259 Name:  ? Medtr7g104930
Secondary Identifier:  ? PAC:31078815
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g104930 0.5kb upstream 0.5kb upstream 2487 true chr7: 42542017-42544503 Medicago truncatula
Medtr7g104930 0.5kb upstream 0.5kb upstream 500 false chr7: 42544004-42544503 Medicago truncatula
Medtr7g104930 0.5kb downstream 0.5kb downstream 2487 true chr7: 42541517-42544003 Medicago truncatula
Medtr7g104930 0.5kb downstream 0.5kb downstream 500 false chr7: 42541517-42542016 Medicago truncatula
Medtr7g104930 1.0kb upstream 1.0kb upstream 2987 true chr7: 42542017-42545003 Medicago truncatula
Medtr7g104930 1.0kb upstream 1.0kb upstream 1000 false chr7: 42544004-42545003 Medicago truncatula
Medtr7g104930 1.0kb downstream 1.0kb downstream 2987 true chr7: 42541017-42544003 Medicago truncatula
Medtr7g104930 1.0kb downstream 1.0kb downstream 1000 false chr7: 42541017-42542016 Medicago truncatula
Medtr7g104930 2.0kb upstream 2.0kb upstream 3987 true chr7: 42542017-42546003 Medicago truncatula
Medtr7g104930 2.0kb upstream 2.0kb upstream 2000 false chr7: 42544004-42546003 Medicago truncatula
Medtr7g104930 2.0kb downstream 2.0kb downstream 3987 true chr7: 42540017-42544003 Medicago truncatula
Medtr7g104930 2.0kb downstream 2.0kb downstream 2000 false chr7: 42540017-42542016 Medicago truncatula
Medtr7g104930 5.0kb upstream 5.0kb upstream 6987 true chr7: 42542017-42549003 Medicago truncatula
Medtr7g104930 5.0kb upstream 5.0kb upstream 5000 false chr7: 42544004-42549003 Medicago truncatula
Medtr7g104930 5.0kb downstream 5.0kb downstream 6987 true chr7: 42537017-42544003 Medicago truncatula
Medtr7g104930 5.0kb downstream 5.0kb downstream 5000 false chr7: 42537017-42542016 Medicago truncatula
Medtr7g104930 10.0kb upstream 10.0kb upstream 11987 true chr7: 42542017-42554003 Medicago truncatula
Medtr7g104930 10.0kb upstream 10.0kb upstream 10000 false chr7: 42544004-42554003 Medicago truncatula
Medtr7g104930 10.0kb downstream 10.0kb downstream 11987 true chr7: 42532017-42544003 Medicago truncatula
Medtr7g104930 10.0kb downstream 10.0kb downstream 10000 false chr7: 42532017-42542016 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310091 5265 Fabidae View MSA
124063734 5270 Rosid View MSA
123743762 5271 Pentapetalae View MSA
122792328 5272 Eudicot View MSA
122043124 5273 Angiosperm View MSA
121347194 5274 Embryophyte View MSA
123426460 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.667       Low
cufflinks 2.436        
cufflinks 2.618        
cufflinks 2.573        
cufflinks 3.676       High
cufflinks 3.273       High
cufflinks 2.776        
cufflinks 2.371        
cufflinks 2.364        

0 Strain