Gene : Medtr7g106190 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR16056:SF2 - TESTIS-EXPRESSED SEQUENCE 10 PROTEIN HOMOLOG Description:  armadillo/beta-catenin-like repeat protein
Genomic Order:  5345 Name:  ? Medtr7g106190
Secondary Identifier:  ? PAC:31079840
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g106190 0.5kb upstream 0.5kb upstream 13259 true chr7: 43140983-43154241 Medicago truncatula
Medtr7g106190 0.5kb upstream 0.5kb upstream 500 false chr7: 43153742-43154241 Medicago truncatula
Medtr7g106190 0.5kb downstream 0.5kb downstream 13259 true chr7: 43140483-43153741 Medicago truncatula
Medtr7g106190 0.5kb downstream 0.5kb downstream 500 false chr7: 43140483-43140982 Medicago truncatula
Medtr7g106190 1.0kb upstream 1.0kb upstream 13759 true chr7: 43140983-43154741 Medicago truncatula
Medtr7g106190 1.0kb upstream 1.0kb upstream 1000 false chr7: 43153742-43154741 Medicago truncatula
Medtr7g106190 1.0kb downstream 1.0kb downstream 13759 true chr7: 43139983-43153741 Medicago truncatula
Medtr7g106190 1.0kb downstream 1.0kb downstream 1000 false chr7: 43139983-43140982 Medicago truncatula
Medtr7g106190 2.0kb upstream 2.0kb upstream 14759 true chr7: 43140983-43155741 Medicago truncatula
Medtr7g106190 2.0kb upstream 2.0kb upstream 2000 false chr7: 43153742-43155741 Medicago truncatula
Medtr7g106190 2.0kb downstream 2.0kb downstream 14759 true chr7: 43138983-43153741 Medicago truncatula
Medtr7g106190 2.0kb downstream 2.0kb downstream 2000 false chr7: 43138983-43140982 Medicago truncatula
Medtr7g106190 5.0kb upstream 5.0kb upstream 17759 true chr7: 43140983-43158741 Medicago truncatula
Medtr7g106190 5.0kb upstream 5.0kb upstream 5000 false chr7: 43153742-43158741 Medicago truncatula
Medtr7g106190 5.0kb downstream 5.0kb downstream 17759 true chr7: 43135983-43153741 Medicago truncatula
Medtr7g106190 5.0kb downstream 5.0kb downstream 5000 false chr7: 43135983-43140982 Medicago truncatula
Medtr7g106190 10.0kb upstream 10.0kb upstream 22759 true chr7: 43140983-43163741 Medicago truncatula
Medtr7g106190 10.0kb upstream 10.0kb upstream 10000 false chr7: 43153742-43163741 Medicago truncatula
Medtr7g106190 10.0kb downstream 10.0kb downstream 22759 true chr7: 43130983-43153741 Medicago truncatula
Medtr7g106190 10.0kb downstream 10.0kb downstream 10000 false chr7: 43130983-43140982 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029601 5273 Angiosperm View MSA
122300482 5265 Fabidae View MSA
124068256 5270 Rosid View MSA
123740186 5271 Pentapetalae View MSA
122789427 5272 Eudicot View MSA
121346343 5274 Embryophyte View MSA
123424675 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.174        
cufflinks 0.255        
cufflinks 0.293        
cufflinks 0.075       Low
cufflinks 0.421       High
cufflinks 0.053     Low Low
cufflinks 0.129        
cufflinks 0.242        
cufflinks 0.128        

0 Strain