Gene : Medtr8g028640 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13087 - NF-KAPPA B ACTIVATING PROTEIN Description:  Ras-induced vulval development antagonist protein
Genomic Order:  1450 Name:  ? Medtr8g028640
Secondary Identifier:  ? PAC:31075552
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g028640 0.5kb upstream 0.5kb upstream 5735   true chr8: 10992334-10998068 Medicago truncatula
Medtr8g028640 0.5kb upstream 0.5kb upstream 500   false chr8: 10997569-10998068 Medicago truncatula
Medtr8g028640 0.5kb downstream 0.5kb downstream 5735   true chr8: 10991834-10997568 Medicago truncatula
Medtr8g028640 0.5kb downstream 0.5kb downstream 500   false chr8: 10991834-10992333 Medicago truncatula
Medtr8g028640 1.0kb upstream 1.0kb upstream 6235   true chr8: 10992334-10998568 Medicago truncatula
Medtr8g028640 1.0kb upstream 1.0kb upstream 1000   false chr8: 10997569-10998568 Medicago truncatula
Medtr8g028640 1.0kb downstream 1.0kb downstream 6235   true chr8: 10991334-10997568 Medicago truncatula
Medtr8g028640 1.0kb downstream 1.0kb downstream 1000   false chr8: 10991334-10992333 Medicago truncatula
Medtr8g028640 2.0kb upstream 2.0kb upstream 7235   true chr8: 10992334-10999568 Medicago truncatula
Medtr8g028640 2.0kb upstream 2.0kb upstream 2000   false chr8: 10997569-10999568 Medicago truncatula
Medtr8g028640 2.0kb downstream 2.0kb downstream 7235   true chr8: 10990334-10997568 Medicago truncatula
Medtr8g028640 2.0kb downstream 2.0kb downstream 2000   false chr8: 10990334-10992333 Medicago truncatula
Medtr8g028640 5.0kb upstream 5.0kb upstream 10235   true chr8: 10992334-11002568 Medicago truncatula
Medtr8g028640 5.0kb upstream 5.0kb upstream 5000   false chr8: 10997569-11002568 Medicago truncatula
Medtr8g028640 5.0kb downstream 5.0kb downstream 10235   true chr8: 10987334-10997568 Medicago truncatula
Medtr8g028640 5.0kb downstream 5.0kb downstream 5000   false chr8: 10987334-10992333 Medicago truncatula
Medtr8g028640 10.0kb upstream 10.0kb upstream 15235   true chr8: 10992334-11007568 Medicago truncatula
Medtr8g028640 10.0kb upstream 10.0kb upstream 10000   false chr8: 10997569-11007568 Medicago truncatula
Medtr8g028640 10.0kb downstream 10.0kb downstream 15235   true chr8: 10982334-10997568 Medicago truncatula
Medtr8g028640 10.0kb downstream 10.0kb downstream 10000   false chr8: 10982334-10992333 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304024 5265 Fabidae View MSA
124063299 5270 Rosid View MSA
123739958 5271 Pentapetalae View MSA
122786035 5272 Eudicot View MSA
122046016 5273 Angiosperm View MSA
121348345 5274 Embryophyte View MSA
123426799 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.685     High High
cufflinks 8.597        
cufflinks 9.479        
cufflinks 4.101       Low
cufflinks 8.885        
cufflinks 4.577       Low
cufflinks 9.113        
cufflinks 8.508        
cufflinks 6.827        

0 Strain