Gene : Medtr8g031000 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Description:  bestrophin-like protein
Genomic Order:  1525 Name:  ? Medtr8g031000
Secondary Identifier:  ? PAC:31076168
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g031000 0.5kb upstream 0.5kb upstream 4671   true chr8: 11553545-11558215 Medicago truncatula
Medtr8g031000 0.5kb upstream 0.5kb upstream 500   false chr8: 11557716-11558215 Medicago truncatula
Medtr8g031000 0.5kb downstream 0.5kb downstream 4671   true chr8: 11553045-11557715 Medicago truncatula
Medtr8g031000 0.5kb downstream 0.5kb downstream 500   false chr8: 11553045-11553544 Medicago truncatula
Medtr8g031000 1.0kb upstream 1.0kb upstream 5171   true chr8: 11553545-11558715 Medicago truncatula
Medtr8g031000 1.0kb upstream 1.0kb upstream 1000   false chr8: 11557716-11558715 Medicago truncatula
Medtr8g031000 1.0kb downstream 1.0kb downstream 5171   true chr8: 11552545-11557715 Medicago truncatula
Medtr8g031000 1.0kb downstream 1.0kb downstream 1000   false chr8: 11552545-11553544 Medicago truncatula
Medtr8g031000 2.0kb upstream 2.0kb upstream 6171   true chr8: 11553545-11559715 Medicago truncatula
Medtr8g031000 2.0kb upstream 2.0kb upstream 2000   false chr8: 11557716-11559715 Medicago truncatula
Medtr8g031000 2.0kb downstream 2.0kb downstream 6171   true chr8: 11551545-11557715 Medicago truncatula
Medtr8g031000 2.0kb downstream 2.0kb downstream 2000   false chr8: 11551545-11553544 Medicago truncatula
Medtr8g031000 5.0kb upstream 5.0kb upstream 9171   true chr8: 11553545-11562715 Medicago truncatula
Medtr8g031000 5.0kb upstream 5.0kb upstream 5000   false chr8: 11557716-11562715 Medicago truncatula
Medtr8g031000 5.0kb downstream 5.0kb downstream 9171   true chr8: 11548545-11557715 Medicago truncatula
Medtr8g031000 5.0kb downstream 5.0kb downstream 5000   false chr8: 11548545-11553544 Medicago truncatula
Medtr8g031000 10.0kb upstream 10.0kb upstream 14171   true chr8: 11553545-11567715 Medicago truncatula
Medtr8g031000 10.0kb upstream 10.0kb upstream 10000   false chr8: 11557716-11567715 Medicago truncatula
Medtr8g031000 10.0kb downstream 10.0kb downstream 14171   true chr8: 11543545-11557715 Medicago truncatula
Medtr8g031000 10.0kb downstream 10.0kb downstream 10000   false chr8: 11543545-11553544 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300742 5265 Fabidae View MSA
124066850 5270 Rosid View MSA
123736824 5271 Pentapetalae View MSA
122787113 5272 Eudicot View MSA
122051206 5273 Angiosperm View MSA
121349752 5274 Embryophyte View MSA
123427884 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.968        
cufflinks 1.889        
cufflinks 1.859        
cufflinks 0.864        
cufflinks 4.554       High
cufflinks 0.851        
cufflinks 0.506       Low
cufflinks 1.588        
cufflinks 0.465       Low

0 Strain