Gene : Medtr8g032300 M. truncatula Mt4.0v1
Defline:  (1 of 26) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED Description:  calcium-dependent lipid-binding (CaLB domain) family protein
Genomic Order:  1613 Name:  ? Medtr8g032300
Secondary Identifier:  ? PAC:31071041
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g032300 0.5kb upstream 0.5kb upstream 2607   true chr8: 12143100-12145706 Medicago truncatula
Medtr8g032300 0.5kb upstream 0.5kb upstream 500   false chr8: 12145207-12145706 Medicago truncatula
Medtr8g032300 0.5kb downstream 0.5kb downstream 2607   true chr8: 12142600-12145206 Medicago truncatula
Medtr8g032300 0.5kb downstream 0.5kb downstream 500   false chr8: 12142600-12143099 Medicago truncatula
Medtr8g032300 1.0kb upstream 1.0kb upstream 3107   true chr8: 12143100-12146206 Medicago truncatula
Medtr8g032300 1.0kb upstream 1.0kb upstream 1000   false chr8: 12145207-12146206 Medicago truncatula
Medtr8g032300 1.0kb downstream 1.0kb downstream 3107   true chr8: 12142100-12145206 Medicago truncatula
Medtr8g032300 1.0kb downstream 1.0kb downstream 1000   false chr8: 12142100-12143099 Medicago truncatula
Medtr8g032300 2.0kb upstream 2.0kb upstream 4107   true chr8: 12143100-12147206 Medicago truncatula
Medtr8g032300 2.0kb upstream 2.0kb upstream 2000   false chr8: 12145207-12147206 Medicago truncatula
Medtr8g032300 2.0kb downstream 2.0kb downstream 4107   true chr8: 12141100-12145206 Medicago truncatula
Medtr8g032300 2.0kb downstream 2.0kb downstream 2000   false chr8: 12141100-12143099 Medicago truncatula
Medtr8g032300 5.0kb upstream 5.0kb upstream 7107   true chr8: 12143100-12150206 Medicago truncatula
Medtr8g032300 5.0kb upstream 5.0kb upstream 5000   false chr8: 12145207-12150206 Medicago truncatula
Medtr8g032300 5.0kb downstream 5.0kb downstream 7107   true chr8: 12138100-12145206 Medicago truncatula
Medtr8g032300 5.0kb downstream 5.0kb downstream 5000   false chr8: 12138100-12143099 Medicago truncatula
Medtr8g032300 10.0kb upstream 10.0kb upstream 12107   true chr8: 12143100-12155206 Medicago truncatula
Medtr8g032300 10.0kb upstream 10.0kb upstream 10000   false chr8: 12145207-12155206 Medicago truncatula
Medtr8g032300 10.0kb downstream 10.0kb downstream 12107   true chr8: 12133100-12145206 Medicago truncatula
Medtr8g032300 10.0kb downstream 10.0kb downstream 10000   false chr8: 12133100-12143099 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308994 5265 Fabidae View MSA
124062814 5270 Rosid View MSA
123751939 5271 Pentapetalae View MSA
122788067 5272 Eudicot View MSA
122043310 5273 Angiosperm View MSA
121351694 5274 Embryophyte View MSA
123426112 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.212        
cufflinks 0.177        
cufflinks 0.197        
cufflinks 1.777        
cufflinks 0.325        
cufflinks 1.434        
cufflinks 2.798       High
cufflinks 0.176        
cufflinks 3.84       High

0 Strain