Gene : Medtr8g033420 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12271//PTHR12271:SF53 - POLY A POLYMERASE CID PAP -RELATED Description:  nucleotidyltransferase family protein
Genomic Order:  1709 Name:  ? Medtr8g033420
Secondary Identifier:  ? PAC:31072197
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g033420 0.5kb upstream 0.5kb upstream 4823   true chr8: 12903936-12908758 Medicago truncatula
Medtr8g033420 0.5kb upstream 0.5kb upstream 500   false chr8: 12908259-12908758 Medicago truncatula
Medtr8g033420 0.5kb downstream 0.5kb downstream 4823   true chr8: 12903436-12908258 Medicago truncatula
Medtr8g033420 0.5kb downstream 0.5kb downstream 500   false chr8: 12903436-12903935 Medicago truncatula
Medtr8g033420 1.0kb upstream 1.0kb upstream 5323   true chr8: 12903936-12909258 Medicago truncatula
Medtr8g033420 1.0kb upstream 1.0kb upstream 1000   false chr8: 12908259-12909258 Medicago truncatula
Medtr8g033420 1.0kb downstream 1.0kb downstream 5323   true chr8: 12902936-12908258 Medicago truncatula
Medtr8g033420 1.0kb downstream 1.0kb downstream 1000   false chr8: 12902936-12903935 Medicago truncatula
Medtr8g033420 2.0kb upstream 2.0kb upstream 6323   true chr8: 12903936-12910258 Medicago truncatula
Medtr8g033420 2.0kb upstream 2.0kb upstream 2000   false chr8: 12908259-12910258 Medicago truncatula
Medtr8g033420 2.0kb downstream 2.0kb downstream 6323   true chr8: 12901936-12908258 Medicago truncatula
Medtr8g033420 2.0kb downstream 2.0kb downstream 2000   false chr8: 12901936-12903935 Medicago truncatula
Medtr8g033420 5.0kb upstream 5.0kb upstream 9323   true chr8: 12903936-12913258 Medicago truncatula
Medtr8g033420 5.0kb upstream 5.0kb upstream 5000   false chr8: 12908259-12913258 Medicago truncatula
Medtr8g033420 5.0kb downstream 5.0kb downstream 9323   true chr8: 12898936-12908258 Medicago truncatula
Medtr8g033420 5.0kb downstream 5.0kb downstream 5000   false chr8: 12898936-12903935 Medicago truncatula
Medtr8g033420 10.0kb upstream 10.0kb upstream 14323   true chr8: 12903936-12918258 Medicago truncatula
Medtr8g033420 10.0kb upstream 10.0kb upstream 10000   false chr8: 12908259-12918258 Medicago truncatula
Medtr8g033420 10.0kb downstream 10.0kb downstream 14323   true chr8: 12893936-12908258 Medicago truncatula
Medtr8g033420 10.0kb downstream 10.0kb downstream 10000   false chr8: 12893936-12903935 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315011 5265 Fabidae View MSA
124067055 5270 Rosid View MSA
123752955 5271 Pentapetalae View MSA
122796167 5272 Eudicot View MSA
122048124 5273 Angiosperm View MSA
121349323 5274 Embryophyte View MSA
123428586 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.416        
cufflinks 7.734        
cufflinks 9.578        
cufflinks 7.196        
cufflinks 7.694        
cufflinks 3.374       Low
cufflinks 8.364        
cufflinks 7.831        
cufflinks 7.681        

0 Strain