Gene : Medtr8g033080 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR18896:SF65 - PHOSPHOLIPASE D BETA 1-RELATED Description:  phospholipase D alpha 1
Genomic Order:  1689 Name:  ? Medtr8g033080
Secondary Identifier:  ? PAC:31074953
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LIPASYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3561 Medicago truncatula pathologic  
Mtruncatula PWY-7039 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g033080 0.5kb upstream 0.5kb upstream 8574   true chr8: 12689232-12697805 Medicago truncatula
Medtr8g033080 0.5kb upstream 0.5kb upstream 500   false chr8: 12697306-12697805 Medicago truncatula
Medtr8g033080 0.5kb downstream 0.5kb downstream 8574   true chr8: 12688732-12697305 Medicago truncatula
Medtr8g033080 0.5kb downstream 0.5kb downstream 500   false chr8: 12688732-12689231 Medicago truncatula
Medtr8g033080 1.0kb upstream 1.0kb upstream 9074   true chr8: 12689232-12698305 Medicago truncatula
Medtr8g033080 1.0kb upstream 1.0kb upstream 1000   false chr8: 12697306-12698305 Medicago truncatula
Medtr8g033080 1.0kb downstream 1.0kb downstream 9074   true chr8: 12688232-12697305 Medicago truncatula
Medtr8g033080 1.0kb downstream 1.0kb downstream 1000   false chr8: 12688232-12689231 Medicago truncatula
Medtr8g033080 2.0kb upstream 2.0kb upstream 10074   true chr8: 12689232-12699305 Medicago truncatula
Medtr8g033080 2.0kb upstream 2.0kb upstream 2000   false chr8: 12697306-12699305 Medicago truncatula
Medtr8g033080 2.0kb downstream 2.0kb downstream 10074   true chr8: 12687232-12697305 Medicago truncatula
Medtr8g033080 2.0kb downstream 2.0kb downstream 2000   false chr8: 12687232-12689231 Medicago truncatula
Medtr8g033080 5.0kb upstream 5.0kb upstream 13074   true chr8: 12689232-12702305 Medicago truncatula
Medtr8g033080 5.0kb upstream 5.0kb upstream 5000   false chr8: 12697306-12702305 Medicago truncatula
Medtr8g033080 5.0kb downstream 5.0kb downstream 13074   true chr8: 12684232-12697305 Medicago truncatula
Medtr8g033080 5.0kb downstream 5.0kb downstream 5000   false chr8: 12684232-12689231 Medicago truncatula
Medtr8g033080 10.0kb upstream 10.0kb upstream 18074   true chr8: 12689232-12707305 Medicago truncatula
Medtr8g033080 10.0kb upstream 10.0kb upstream 10000   false chr8: 12697306-12707305 Medicago truncatula
Medtr8g033080 10.0kb downstream 10.0kb downstream 18074   true chr8: 12679232-12697305 Medicago truncatula
Medtr8g033080 10.0kb downstream 10.0kb downstream 10000   false chr8: 12679232-12689231 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298236 5265 Fabidae View MSA
124072300 5270 Rosid View MSA
123749008 5271 Pentapetalae View MSA
122790888 5272 Eudicot View MSA
122043294 5273 Angiosperm View MSA
121349961 5274 Embryophyte View MSA
123381517 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.913       High
cufflinks 1.6        
cufflinks 1.226        
cufflinks 2.77        
cufflinks 1.066       Low
cufflinks 3.139        
cufflinks 6.368       High
cufflinks 1.012       Low
cufflinks 4.611        

0 Strain