Gene : Medtr8g022210 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21136//PTHR21136:SF89 - SNARE PROTEINS Description:  synaptobrevin-like protein
Genomic Order:  1077 Name:  ? Medtr8g022210
Secondary Identifier:  ? PAC:31076593
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g022210 0.5kb upstream 0.5kb upstream 7359   true chr8: 7839245-7846603 Medicago truncatula
Medtr8g022210 0.5kb upstream 0.5kb upstream 500   false chr8: 7839245-7839744 Medicago truncatula
Medtr8g022210 0.5kb downstream 0.5kb downstream 7359   true chr8: 7839745-7847103 Medicago truncatula
Medtr8g022210 0.5kb downstream 0.5kb downstream 500   false chr8: 7846604-7847103 Medicago truncatula
Medtr8g022210 1.0kb upstream 1.0kb upstream 7859   true chr8: 7838745-7846603 Medicago truncatula
Medtr8g022210 1.0kb upstream 1.0kb upstream 1000   false chr8: 7838745-7839744 Medicago truncatula
Medtr8g022210 1.0kb downstream 1.0kb downstream 7859   true chr8: 7839745-7847603 Medicago truncatula
Medtr8g022210 1.0kb downstream 1.0kb downstream 1000   false chr8: 7846604-7847603 Medicago truncatula
Medtr8g022210 2.0kb upstream 2.0kb upstream 8859   true chr8: 7837745-7846603 Medicago truncatula
Medtr8g022210 2.0kb upstream 2.0kb upstream 2000   false chr8: 7837745-7839744 Medicago truncatula
Medtr8g022210 2.0kb downstream 2.0kb downstream 8859   true chr8: 7839745-7848603 Medicago truncatula
Medtr8g022210 2.0kb downstream 2.0kb downstream 2000   false chr8: 7846604-7848603 Medicago truncatula
Medtr8g022210 5.0kb upstream 5.0kb upstream 11859   true chr8: 7834745-7846603 Medicago truncatula
Medtr8g022210 5.0kb upstream 5.0kb upstream 5000   false chr8: 7834745-7839744 Medicago truncatula
Medtr8g022210 5.0kb downstream 5.0kb downstream 11859   true chr8: 7839745-7851603 Medicago truncatula
Medtr8g022210 5.0kb downstream 5.0kb downstream 5000   false chr8: 7846604-7851603 Medicago truncatula
Medtr8g022210 10.0kb upstream 10.0kb upstream 16859   true chr8: 7829745-7846603 Medicago truncatula
Medtr8g022210 10.0kb upstream 10.0kb upstream 10000   false chr8: 7829745-7839744 Medicago truncatula
Medtr8g022210 10.0kb downstream 10.0kb downstream 16859   true chr8: 7839745-7856603 Medicago truncatula
Medtr8g022210 10.0kb downstream 10.0kb downstream 10000   false chr8: 7846604-7856603 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300389 5265 Fabidae View MSA
124065843 5270 Rosid View MSA
123753791 5271 Pentapetalae View MSA
122788214 5272 Eudicot View MSA
122046474 5273 Angiosperm View MSA
121346313 5274 Embryophyte View MSA
123424515 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.258        
cufflinks 1.544        
cufflinks 1.203        
cufflinks 1.379        
cufflinks 1.965       High
cufflinks 0.44       Low
cufflinks 1.225        
cufflinks 1.053        
cufflinks 1.514        

0 Strain