Gene : Medtr8g021225 M. truncatula Mt4.0v1

Defline:  (1 of 3) PTHR10509//PTHR10509:SF29 - O-METHYLTRANSFERASE-RELATED Description:  caffeoyl-CoA O-methyltransferase
Genomic Order:  1050 Name:  ? Medtr8g021225
Secondary Identifier:  ? PAC:31070826

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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1121 Medicago truncatula pathologic  
Mtruncatula PWY-361 Medicago truncatula pathologic  

Genomics

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Gene Structure Displayer

Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g021225 0.5kb upstream 0.5kb upstream 2639   true chr8: 7587420-7590058 Medicago truncatula
Medtr8g021225 0.5kb upstream 0.5kb upstream 500   false chr8: 7589559-7590058 Medicago truncatula
Medtr8g021225 0.5kb downstream 0.5kb downstream 2639   true chr8: 7586920-7589558 Medicago truncatula
Medtr8g021225 0.5kb downstream 0.5kb downstream 500   false chr8: 7586920-7587419 Medicago truncatula
Medtr8g021225 1.0kb upstream 1.0kb upstream 3139   true chr8: 7587420-7590558 Medicago truncatula
Medtr8g021225 1.0kb upstream 1.0kb upstream 1000   false chr8: 7589559-7590558 Medicago truncatula
Medtr8g021225 1.0kb downstream 1.0kb downstream 3139   true chr8: 7586420-7589558 Medicago truncatula
Medtr8g021225 1.0kb downstream 1.0kb downstream 1000   false chr8: 7586420-7587419 Medicago truncatula
Medtr8g021225 2.0kb upstream 2.0kb upstream 4139   true chr8: 7587420-7591558 Medicago truncatula
Medtr8g021225 2.0kb upstream 2.0kb upstream 2000   false chr8: 7589559-7591558 Medicago truncatula
Medtr8g021225 2.0kb downstream 2.0kb downstream 4139   true chr8: 7585420-7589558 Medicago truncatula
Medtr8g021225 2.0kb downstream 2.0kb downstream 2000   false chr8: 7585420-7587419 Medicago truncatula
Medtr8g021225 5.0kb upstream 5.0kb upstream 7139   true chr8: 7587420-7594558 Medicago truncatula
Medtr8g021225 5.0kb upstream 5.0kb upstream 5000   false chr8: 7589559-7594558 Medicago truncatula
Medtr8g021225 5.0kb downstream 5.0kb downstream 7139   true chr8: 7582420-7589558 Medicago truncatula
Medtr8g021225 5.0kb downstream 5.0kb downstream 5000   false chr8: 7582420-7587419 Medicago truncatula
Medtr8g021225 10.0kb upstream 10.0kb upstream 12139   true chr8: 7587420-7599558 Medicago truncatula
Medtr8g021225 10.0kb upstream 10.0kb upstream 10000   false chr8: 7589559-7599558 Medicago truncatula
Medtr8g021225 10.0kb downstream 10.0kb downstream 12139   true chr8: 7577420-7589558 Medicago truncatula
Medtr8g021225 10.0kb downstream 10.0kb downstream 10000   false chr8: 7577420-7587419 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314949 5265 Fabidae View MSA
124070229 5270 Rosid View MSA
123751667 5271 Pentapetalae View MSA
122774127 5272 Eudicot View MSA
122050348 5273 Angiosperm View MSA
121311864 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.776        
cufflinks 0.151        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.499        
cufflinks 0.057     Low  
cufflinks 0.006     Low Low
cufflinks 0.37        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain