Gene : Medtr8g022870 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10795:SF424 - SUBTILASE FAMILY PROTEIN-RELATED Description:  subtilisin-like serine protease
Genomic Order:  1119 Name:  ? Medtr8g022870
Secondary Identifier:  ? PAC:31072159
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g022870 0.5kb upstream 0.5kb upstream 3334   true chr8: 8132028-8135361 Medicago truncatula
Medtr8g022870 0.5kb upstream 0.5kb upstream 500   false chr8: 8134862-8135361 Medicago truncatula
Medtr8g022870 0.5kb downstream 0.5kb downstream 3334   true chr8: 8131528-8134861 Medicago truncatula
Medtr8g022870 0.5kb downstream 0.5kb downstream 500   false chr8: 8131528-8132027 Medicago truncatula
Medtr8g022870 1.0kb upstream 1.0kb upstream 3834   true chr8: 8132028-8135861 Medicago truncatula
Medtr8g022870 1.0kb upstream 1.0kb upstream 1000   false chr8: 8134862-8135861 Medicago truncatula
Medtr8g022870 1.0kb downstream 1.0kb downstream 3834   true chr8: 8131028-8134861 Medicago truncatula
Medtr8g022870 1.0kb downstream 1.0kb downstream 1000   false chr8: 8131028-8132027 Medicago truncatula
Medtr8g022870 2.0kb upstream 2.0kb upstream 4834   true chr8: 8132028-8136861 Medicago truncatula
Medtr8g022870 2.0kb upstream 2.0kb upstream 2000   false chr8: 8134862-8136861 Medicago truncatula
Medtr8g022870 2.0kb downstream 2.0kb downstream 4834   true chr8: 8130028-8134861 Medicago truncatula
Medtr8g022870 2.0kb downstream 2.0kb downstream 2000   false chr8: 8130028-8132027 Medicago truncatula
Medtr8g022870 5.0kb upstream 5.0kb upstream 7834   true chr8: 8132028-8139861 Medicago truncatula
Medtr8g022870 5.0kb upstream 5.0kb upstream 5000   false chr8: 8134862-8139861 Medicago truncatula
Medtr8g022870 5.0kb downstream 5.0kb downstream 7834   true chr8: 8127028-8134861 Medicago truncatula
Medtr8g022870 5.0kb downstream 5.0kb downstream 5000   false chr8: 8127028-8132027 Medicago truncatula
Medtr8g022870 10.0kb upstream 10.0kb upstream 12834   true chr8: 8132028-8144861 Medicago truncatula
Medtr8g022870 10.0kb upstream 10.0kb upstream 10000   false chr8: 8134862-8144861 Medicago truncatula
Medtr8g022870 10.0kb downstream 10.0kb downstream 12834   true chr8: 8122028-8134861 Medicago truncatula
Medtr8g022870 10.0kb downstream 10.0kb downstream 10000   false chr8: 8122028-8132027 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306301 5265 Fabidae View MSA
124068679 5270 Rosid View MSA
123753606 5271 Pentapetalae View MSA
122797256 5272 Eudicot View MSA
122051606 5273 Angiosperm View MSA
121349729 5274 Embryophyte View MSA
123428602 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.534        
cufflinks 10.902     High  
cufflinks 5.466        
cufflinks 4.408        
cufflinks 24.026     High High
cufflinks 0.643       Low
cufflinks 4.104        
cufflinks 6.88        
cufflinks 8.822        

0 Strain