Gene : Medtr8g024310 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG0225 - Pyruvate dehydrogenase E1, alpha subunit Description:  pyruvate dehydrogenase E1 component, alpha subunit
Genomic Order:  1210 Name:  ? Medtr8g024310
Secondary Identifier:  ? PAC:31070419
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5173 Medicago truncatula pathologic  
Mtruncatula PWY-5464 Medicago truncatula pathologic  
Mtruncatula PYRUVDEHYD-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g024310 0.5kb upstream 0.5kb upstream 4793   true chr8: 8913902-8918694 Medicago truncatula
Medtr8g024310 0.5kb upstream 0.5kb upstream 500   false chr8: 8918195-8918694 Medicago truncatula
Medtr8g024310 0.5kb downstream 0.5kb downstream 4793   true chr8: 8913402-8918194 Medicago truncatula
Medtr8g024310 0.5kb downstream 0.5kb downstream 500   false chr8: 8913402-8913901 Medicago truncatula
Medtr8g024310 1.0kb upstream 1.0kb upstream 5293   true chr8: 8913902-8919194 Medicago truncatula
Medtr8g024310 1.0kb upstream 1.0kb upstream 1000   false chr8: 8918195-8919194 Medicago truncatula
Medtr8g024310 1.0kb downstream 1.0kb downstream 5293   true chr8: 8912902-8918194 Medicago truncatula
Medtr8g024310 1.0kb downstream 1.0kb downstream 1000   false chr8: 8912902-8913901 Medicago truncatula
Medtr8g024310 2.0kb upstream 2.0kb upstream 6293   true chr8: 8913902-8920194 Medicago truncatula
Medtr8g024310 2.0kb upstream 2.0kb upstream 2000   false chr8: 8918195-8920194 Medicago truncatula
Medtr8g024310 2.0kb downstream 2.0kb downstream 6293   true chr8: 8911902-8918194 Medicago truncatula
Medtr8g024310 2.0kb downstream 2.0kb downstream 2000   false chr8: 8911902-8913901 Medicago truncatula
Medtr8g024310 5.0kb upstream 5.0kb upstream 9293   true chr8: 8913902-8923194 Medicago truncatula
Medtr8g024310 5.0kb upstream 5.0kb upstream 5000   false chr8: 8918195-8923194 Medicago truncatula
Medtr8g024310 5.0kb downstream 5.0kb downstream 9293   true chr8: 8908902-8918194 Medicago truncatula
Medtr8g024310 5.0kb downstream 5.0kb downstream 5000   false chr8: 8908902-8913901 Medicago truncatula
Medtr8g024310 10.0kb upstream 10.0kb upstream 14293   true chr8: 8913902-8928194 Medicago truncatula
Medtr8g024310 10.0kb upstream 10.0kb upstream 10000   false chr8: 8918195-8928194 Medicago truncatula
Medtr8g024310 10.0kb downstream 10.0kb downstream 14293   true chr8: 8903902-8918194 Medicago truncatula
Medtr8g024310 10.0kb downstream 10.0kb downstream 10000   false chr8: 8903902-8913901 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309169 5265 Fabidae View MSA
124066481 5270 Rosid View MSA
123745685 5271 Pentapetalae View MSA
122791580 5272 Eudicot View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.682       Low
cufflinks 51.781     High  
cufflinks 63.117     High High
cufflinks 8.212        
cufflinks 59.025     High  
cufflinks 1.994       Low
cufflinks 8.216        
cufflinks 56.211     High  
cufflinks 13.304     High  

0 Strain