Gene : Medtr8g028040 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23416:SF2 - SERINE ACETYLTRANSFERASE 5 Description:  serine acetyltransferase
Genomic Order:  1369 Name:  ? Medtr8g028040
Secondary Identifier:  ? PAC:31070588
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CYSTSYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-6936 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g028040 0.5kb upstream 0.5kb upstream 2962   true chr8: 10382533-10385494 Medicago truncatula
Medtr8g028040 0.5kb upstream 0.5kb upstream 500   false chr8: 10382533-10383032 Medicago truncatula
Medtr8g028040 0.5kb downstream 0.5kb downstream 2962   true chr8: 10383033-10385994 Medicago truncatula
Medtr8g028040 0.5kb downstream 0.5kb downstream 500   false chr8: 10385495-10385994 Medicago truncatula
Medtr8g028040 1.0kb upstream 1.0kb upstream 3462   true chr8: 10382033-10385494 Medicago truncatula
Medtr8g028040 1.0kb upstream 1.0kb upstream 1000   false chr8: 10382033-10383032 Medicago truncatula
Medtr8g028040 1.0kb downstream 1.0kb downstream 3462   true chr8: 10383033-10386494 Medicago truncatula
Medtr8g028040 1.0kb downstream 1.0kb downstream 1000   false chr8: 10385495-10386494 Medicago truncatula
Medtr8g028040 2.0kb upstream 2.0kb upstream 4462   true chr8: 10381033-10385494 Medicago truncatula
Medtr8g028040 2.0kb upstream 2.0kb upstream 2000   false chr8: 10381033-10383032 Medicago truncatula
Medtr8g028040 2.0kb downstream 2.0kb downstream 4462   true chr8: 10383033-10387494 Medicago truncatula
Medtr8g028040 2.0kb downstream 2.0kb downstream 2000   false chr8: 10385495-10387494 Medicago truncatula
Medtr8g028040 5.0kb upstream 5.0kb upstream 7462   true chr8: 10378033-10385494 Medicago truncatula
Medtr8g028040 5.0kb upstream 5.0kb upstream 5000   false chr8: 10378033-10383032 Medicago truncatula
Medtr8g028040 5.0kb downstream 5.0kb downstream 7462   true chr8: 10383033-10390494 Medicago truncatula
Medtr8g028040 5.0kb downstream 5.0kb downstream 5000   false chr8: 10385495-10390494 Medicago truncatula
Medtr8g028040 10.0kb upstream 10.0kb upstream 12462   true chr8: 10373033-10385494 Medicago truncatula
Medtr8g028040 10.0kb upstream 10.0kb upstream 10000   false chr8: 10373033-10383032 Medicago truncatula
Medtr8g028040 10.0kb downstream 10.0kb downstream 12462   true chr8: 10383033-10395494 Medicago truncatula
Medtr8g028040 10.0kb downstream 10.0kb downstream 10000   false chr8: 10385495-10395494 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309116 5265 Fabidae View MSA
124068098 5270 Rosid View MSA
123738273 5271 Pentapetalae View MSA
122789751 5272 Eudicot View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.865       Low
cufflinks 8.614        
cufflinks 8.266        
cufflinks 20.149     High High
cufflinks 7.903        
cufflinks 20.229     High High
cufflinks 4.414       Low
cufflinks 7.103        
cufflinks 11.011     High  

0 Strain