Gene : Medtr8g027915 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR33978:SF2 - EXPRESSED PROTEIN Description:  hypothetical protein
Genomic Order:  1351 Name:  ? Medtr8g027915
Secondary Identifier:  ? PAC:31076230
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g027915 0.5kb upstream 0.5kb upstream 1642   true chr8: 10237554-10239195 Medicago truncatula
Medtr8g027915 0.5kb upstream 0.5kb upstream 500   false chr8: 10238696-10239195 Medicago truncatula
Medtr8g027915 0.5kb downstream 0.5kb downstream 1642   true chr8: 10237054-10238695 Medicago truncatula
Medtr8g027915 0.5kb downstream 0.5kb downstream 500   false chr8: 10237054-10237553 Medicago truncatula
Medtr8g027915 1.0kb upstream 1.0kb upstream 2142   true chr8: 10237554-10239695 Medicago truncatula
Medtr8g027915 1.0kb upstream 1.0kb upstream 1000   false chr8: 10238696-10239695 Medicago truncatula
Medtr8g027915 1.0kb downstream 1.0kb downstream 2142   true chr8: 10236554-10238695 Medicago truncatula
Medtr8g027915 1.0kb downstream 1.0kb downstream 1000   false chr8: 10236554-10237553 Medicago truncatula
Medtr8g027915 2.0kb upstream 2.0kb upstream 3142   true chr8: 10237554-10240695 Medicago truncatula
Medtr8g027915 2.0kb upstream 2.0kb upstream 2000   false chr8: 10238696-10240695 Medicago truncatula
Medtr8g027915 2.0kb downstream 2.0kb downstream 3142   true chr8: 10235554-10238695 Medicago truncatula
Medtr8g027915 2.0kb downstream 2.0kb downstream 2000   false chr8: 10235554-10237553 Medicago truncatula
Medtr8g027915 5.0kb upstream 5.0kb upstream 6142   true chr8: 10237554-10243695 Medicago truncatula
Medtr8g027915 5.0kb upstream 5.0kb upstream 5000   false chr8: 10238696-10243695 Medicago truncatula
Medtr8g027915 5.0kb downstream 5.0kb downstream 6142   true chr8: 10232554-10238695 Medicago truncatula
Medtr8g027915 5.0kb downstream 5.0kb downstream 5000   false chr8: 10232554-10237553 Medicago truncatula
Medtr8g027915 10.0kb upstream 10.0kb upstream 11142   true chr8: 10237554-10248695 Medicago truncatula
Medtr8g027915 10.0kb upstream 10.0kb upstream 10000   false chr8: 10238696-10248695 Medicago truncatula
Medtr8g027915 10.0kb downstream 10.0kb downstream 11142   true chr8: 10227554-10238695 Medicago truncatula
Medtr8g027915 10.0kb downstream 10.0kb downstream 10000   false chr8: 10227554-10237553 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029230 5273 Angiosperm View MSA
122288225 5265 Fabidae View MSA
124073990 5270 Rosid View MSA
123746126 5271 Pentapetalae View MSA
122796980 5272 Eudicot View MSA
121298592 5274 Embryophyte View MSA
123336555 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.354        
cufflinks 0.01     Low Low
cufflinks 0.013     Low Low
cufflinks 3.253        
cufflinks 0.041     Low  
cufflinks 3.428       High
cufflinks 1.289        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.661        

0 Strain