Gene : Medtr8g027900 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Description:  Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein
Genomic Order:  1348 Name:  ? Medtr8g027900
Secondary Identifier:  ? PAC:31069647
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g027900 0.5kb upstream 0.5kb upstream 5221   true chr8: 10220259-10225479 Medicago truncatula
Medtr8g027900 0.5kb upstream 0.5kb upstream 500   false chr8: 10224980-10225479 Medicago truncatula
Medtr8g027900 0.5kb downstream 0.5kb downstream 5221   true chr8: 10219759-10224979 Medicago truncatula
Medtr8g027900 0.5kb downstream 0.5kb downstream 500   false chr8: 10219759-10220258 Medicago truncatula
Medtr8g027900 1.0kb upstream 1.0kb upstream 5721   true chr8: 10220259-10225979 Medicago truncatula
Medtr8g027900 1.0kb upstream 1.0kb upstream 1000   false chr8: 10224980-10225979 Medicago truncatula
Medtr8g027900 1.0kb downstream 1.0kb downstream 5721   true chr8: 10219259-10224979 Medicago truncatula
Medtr8g027900 1.0kb downstream 1.0kb downstream 1000   false chr8: 10219259-10220258 Medicago truncatula
Medtr8g027900 2.0kb upstream 2.0kb upstream 6721   true chr8: 10220259-10226979 Medicago truncatula
Medtr8g027900 2.0kb upstream 2.0kb upstream 2000   false chr8: 10224980-10226979 Medicago truncatula
Medtr8g027900 2.0kb downstream 2.0kb downstream 6721   true chr8: 10218259-10224979 Medicago truncatula
Medtr8g027900 2.0kb downstream 2.0kb downstream 2000   false chr8: 10218259-10220258 Medicago truncatula
Medtr8g027900 5.0kb upstream 5.0kb upstream 9721   true chr8: 10220259-10229979 Medicago truncatula
Medtr8g027900 5.0kb upstream 5.0kb upstream 5000   false chr8: 10224980-10229979 Medicago truncatula
Medtr8g027900 5.0kb downstream 5.0kb downstream 9721   true chr8: 10215259-10224979 Medicago truncatula
Medtr8g027900 5.0kb downstream 5.0kb downstream 5000   false chr8: 10215259-10220258 Medicago truncatula
Medtr8g027900 10.0kb upstream 10.0kb upstream 14721   true chr8: 10220259-10234979 Medicago truncatula
Medtr8g027900 10.0kb upstream 10.0kb upstream 10000   false chr8: 10224980-10234979 Medicago truncatula
Medtr8g027900 10.0kb downstream 10.0kb downstream 14721   true chr8: 10210259-10224979 Medicago truncatula
Medtr8g027900 10.0kb downstream 10.0kb downstream 10000   false chr8: 10210259-10220258 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304359 5265 Fabidae View MSA
124060800 5270 Rosid View MSA
123736639 5271 Pentapetalae View MSA
122792131 5272 Eudicot View MSA
122046585 5273 Angiosperm View MSA
121348167 5274 Embryophyte View MSA
123380754 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.687        
cufflinks 1.71        
cufflinks 1.714        
cufflinks 2.564       High
cufflinks 2.206        
cufflinks 0.974       Low
cufflinks 1.65        
cufflinks 1.402        
cufflinks 2.217        

0 Strain