Gene : Medtr8g028230 M. truncatula Mt4.0v1
Description:  intracellular protein transporter USO1-like protein, putative Genomic Order:  1397
Name:  ? Medtr8g028230 Secondary Identifier:  ? PAC:31073391
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g028230 0.5kb upstream 0.5kb upstream 3706   true chr8: 10560756-10564461 Medicago truncatula
Medtr8g028230 0.5kb upstream 0.5kb upstream 500   false chr8: 10563962-10564461 Medicago truncatula
Medtr8g028230 0.5kb downstream 0.5kb downstream 3706   true chr8: 10560256-10563961 Medicago truncatula
Medtr8g028230 0.5kb downstream 0.5kb downstream 500   false chr8: 10560256-10560755 Medicago truncatula
Medtr8g028230 1.0kb upstream 1.0kb upstream 4206   true chr8: 10560756-10564961 Medicago truncatula
Medtr8g028230 1.0kb upstream 1.0kb upstream 1000   false chr8: 10563962-10564961 Medicago truncatula
Medtr8g028230 1.0kb downstream 1.0kb downstream 4206   true chr8: 10559756-10563961 Medicago truncatula
Medtr8g028230 1.0kb downstream 1.0kb downstream 1000   false chr8: 10559756-10560755 Medicago truncatula
Medtr8g028230 2.0kb upstream 2.0kb upstream 5206   true chr8: 10560756-10565961 Medicago truncatula
Medtr8g028230 2.0kb upstream 2.0kb upstream 2000   false chr8: 10563962-10565961 Medicago truncatula
Medtr8g028230 2.0kb downstream 2.0kb downstream 5206   true chr8: 10558756-10563961 Medicago truncatula
Medtr8g028230 2.0kb downstream 2.0kb downstream 2000   false chr8: 10558756-10560755 Medicago truncatula
Medtr8g028230 5.0kb upstream 5.0kb upstream 8206   true chr8: 10560756-10568961 Medicago truncatula
Medtr8g028230 5.0kb upstream 5.0kb upstream 5000   false chr8: 10563962-10568961 Medicago truncatula
Medtr8g028230 5.0kb downstream 5.0kb downstream 8206   true chr8: 10555756-10563961 Medicago truncatula
Medtr8g028230 5.0kb downstream 5.0kb downstream 5000   false chr8: 10555756-10560755 Medicago truncatula
Medtr8g028230 10.0kb upstream 10.0kb upstream 13206   true chr8: 10560756-10573961 Medicago truncatula
Medtr8g028230 10.0kb upstream 10.0kb upstream 10000   false chr8: 10563962-10573961 Medicago truncatula
Medtr8g028230 10.0kb downstream 10.0kb downstream 13206   true chr8: 10550756-10563961 Medicago truncatula
Medtr8g028230 10.0kb downstream 10.0kb downstream 10000   false chr8: 10550756-10560755 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307724 5265 Fabidae View MSA
124072107 5270 Rosid View MSA
123750140 5271 Pentapetalae View MSA
122797498 5272 Eudicot View MSA
122044970 5273 Angiosperm View MSA
121310375 5274 Embryophyte View MSA
123347876 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.832       High
cufflinks 0.174        
cufflinks 0.096        
cufflinks 0.004     Low Low
cufflinks 0.225        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.138        
cufflinks 0.027     Low  

0 Strain