Gene : Medtr8g016010 M. truncatula Mt4.0v1
Defline:  (1 of 6) KOG2355 - Predicted ABC-type transport, ATPase component/CCR4 associated factor Description:  ABC transporter C family protein
Genomic Order:  761 Name:  ? Medtr8g016010
Secondary Identifier:  ? PAC:31076058
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g016010 0.5kb upstream 0.5kb upstream 4589   true chr8: 5305911-5310499 Medicago truncatula
Medtr8g016010 0.5kb upstream 0.5kb upstream 500   false chr8: 5305911-5306410 Medicago truncatula
Medtr8g016010 0.5kb downstream 0.5kb downstream 4589   true chr8: 5306411-5310999 Medicago truncatula
Medtr8g016010 0.5kb downstream 0.5kb downstream 500   false chr8: 5310500-5310999 Medicago truncatula
Medtr8g016010 1.0kb upstream 1.0kb upstream 5089   true chr8: 5305411-5310499 Medicago truncatula
Medtr8g016010 1.0kb upstream 1.0kb upstream 1000   false chr8: 5305411-5306410 Medicago truncatula
Medtr8g016010 1.0kb downstream 1.0kb downstream 5089   true chr8: 5306411-5311499 Medicago truncatula
Medtr8g016010 1.0kb downstream 1.0kb downstream 1000   false chr8: 5310500-5311499 Medicago truncatula
Medtr8g016010 2.0kb upstream 2.0kb upstream 6089   true chr8: 5304411-5310499 Medicago truncatula
Medtr8g016010 2.0kb upstream 2.0kb upstream 2000   false chr8: 5304411-5306410 Medicago truncatula
Medtr8g016010 2.0kb downstream 2.0kb downstream 6089   true chr8: 5306411-5312499 Medicago truncatula
Medtr8g016010 2.0kb downstream 2.0kb downstream 2000   false chr8: 5310500-5312499 Medicago truncatula
Medtr8g016010 5.0kb upstream 5.0kb upstream 9089   true chr8: 5301411-5310499 Medicago truncatula
Medtr8g016010 5.0kb upstream 5.0kb upstream 5000   false chr8: 5301411-5306410 Medicago truncatula
Medtr8g016010 5.0kb downstream 5.0kb downstream 9089   true chr8: 5306411-5315499 Medicago truncatula
Medtr8g016010 5.0kb downstream 5.0kb downstream 5000   false chr8: 5310500-5315499 Medicago truncatula
Medtr8g016010 10.0kb upstream 10.0kb upstream 14089   true chr8: 5296411-5310499 Medicago truncatula
Medtr8g016010 10.0kb upstream 10.0kb upstream 10000   false chr8: 5296411-5306410 Medicago truncatula
Medtr8g016010 10.0kb downstream 10.0kb downstream 14089   true chr8: 5306411-5320499 Medicago truncatula
Medtr8g016010 10.0kb downstream 10.0kb downstream 10000   false chr8: 5310500-5320499 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298282 5265 Fabidae View MSA
124074189 5270 Rosid View MSA
123753057 5271 Pentapetalae View MSA
122797435 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.013     Low  
cufflinks 0.091        
cufflinks 0.046     Low  
cufflinks 0.012     Low  
cufflinks 0.133       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07        
cufflinks 0.009     Low Low

0 Strain