Gene : Medtr8g016940 M. truncatula Mt4.0v1
Defline:  (1 of 12) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase Description:  beta-amyrin synthase
Genomic Order:  811 Name:  ? Medtr8g016940
Secondary Identifier:  ? PAC:31070482
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5203 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g016940 0.5kb upstream 0.5kb upstream 3180   true chr8: 5651361-5654540 Medicago truncatula
Medtr8g016940 0.5kb upstream 0.5kb upstream 500   false chr8: 5654041-5654540 Medicago truncatula
Medtr8g016940 0.5kb downstream 0.5kb downstream 3180   true chr8: 5650861-5654040 Medicago truncatula
Medtr8g016940 0.5kb downstream 0.5kb downstream 500   false chr8: 5650861-5651360 Medicago truncatula
Medtr8g016940 1.0kb upstream 1.0kb upstream 3680   true chr8: 5651361-5655040 Medicago truncatula
Medtr8g016940 1.0kb upstream 1.0kb upstream 1000   false chr8: 5654041-5655040 Medicago truncatula
Medtr8g016940 1.0kb downstream 1.0kb downstream 3680   true chr8: 5650361-5654040 Medicago truncatula
Medtr8g016940 1.0kb downstream 1.0kb downstream 1000   false chr8: 5650361-5651360 Medicago truncatula
Medtr8g016940 2.0kb upstream 2.0kb upstream 4680   true chr8: 5651361-5656040 Medicago truncatula
Medtr8g016940 2.0kb upstream 2.0kb upstream 2000   false chr8: 5654041-5656040 Medicago truncatula
Medtr8g016940 2.0kb downstream 2.0kb downstream 4680   true chr8: 5649361-5654040 Medicago truncatula
Medtr8g016940 2.0kb downstream 2.0kb downstream 2000   false chr8: 5649361-5651360 Medicago truncatula
Medtr8g016940 5.0kb upstream 5.0kb upstream 7680   true chr8: 5651361-5659040 Medicago truncatula
Medtr8g016940 5.0kb upstream 5.0kb upstream 5000   false chr8: 5654041-5659040 Medicago truncatula
Medtr8g016940 5.0kb downstream 5.0kb downstream 7680   true chr8: 5646361-5654040 Medicago truncatula
Medtr8g016940 5.0kb downstream 5.0kb downstream 5000   false chr8: 5646361-5651360 Medicago truncatula
Medtr8g016940 10.0kb upstream 10.0kb upstream 12680   true chr8: 5651361-5664040 Medicago truncatula
Medtr8g016940 10.0kb upstream 10.0kb upstream 10000   false chr8: 5654041-5664040 Medicago truncatula
Medtr8g016940 10.0kb downstream 10.0kb downstream 12680   true chr8: 5641361-5654040 Medicago truncatula
Medtr8g016940 10.0kb downstream 10.0kb downstream 10000   false chr8: 5641361-5651360 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028959 5273 Angiosperm View MSA
122315111 5265 Fabidae View MSA
124073240 5270 Rosid View MSA
123747088 5271 Pentapetalae View MSA
122797329 5272 Eudicot View MSA
121298379 5274 Embryophyte View MSA
123336355 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain