Protein Family : PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 122797329

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  50

50 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29702.t000001 (1 of 2) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase R. communis v0.1 8347   29702: 629-8975
33225.t000001 (1 of 7) 5.4.99.41 - Lupeol synthase R. communis v0.1 1223   33225: 65-1287
Cucsa.033950 (1 of 4) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase C. sativus v1.0 3948   scaffold00438: 574859-578806
Cucsa.033940 (1 of 4) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase C. sativus v1.0 2209   scaffold00438: 551467-553675
orange1.1g010631m.g (1 of 2) PTHR11764:SF15 - CYCLOARTENOL SYNTHASE C. sinensis v1.1 7012   scaffold00057: 60492-67503
Ciclev10031300m.g (1 of 5) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase C. clementina v1.0 6932   scaffold_4: 16468282-16475213
Ciclev10031967m.g (1 of 9) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase C. clementina v1.0 4516   scaffold_4: 5629139-5633654
Lus10016438.g (1 of 9) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase L. usitatissimum v1.0 1216   scaffold179: 589323-590538
Lus10019673.g (1 of 9) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase L. usitatissimum v1.0 1525   scaffold420: 245157-246681
Lus10019674.g (1 of 9) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase L. usitatissimum v1.0 1824   scaffold420: 247522-249345
Migut.D01712 (1 of 5) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase M. guttatus v2.0 7158   scaffold_4: 14577636-14584793
Glyma.15G065600 (1 of 8) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase G. max Wm82.a2.v1 4523   Chr15: 4981427-4985949
Medtr8g016940 (1 of 12) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase M. truncatula Mt4.0v1 2680   chr8: 5651361-5654040
SapurV1A.0280s0010 (1 of 4) PTHR11764:SF18 - AMYRIN SYNTHASE LUP2-RELATED S. purpurea v1.0 1982   chr01: 2775968-2777949
SapurV1A.0660s0220 (1 of 2) 5.4.99.35 - Taraxerol synthase S. purpurea v1.0 1805   chr04: 655041-656845
SapurV1A.0660s0230 (1 of 2) 5.4.99.35 - Taraxerol synthase S. purpurea v1.0 1805   chr04: 652267-654071
SapurV1A.0660s0200 (1 of 1) PF13243//PF13249 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) // Squalene-hopene cyclase N-terminal domain (SQHop_cyclase_N) S. purpurea v1.0 5561   chr04: 673324-678884
Eucgr.F04220 (1 of 19) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase E. grandis v2.0 3737   Chr06: 52907220-52910956
Eucgr.F04226 (1 of 19) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase E. grandis v2.0 2289   Chr06: 52997581-52999869
Eucgr.L01637 (1 of 19) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase E. grandis v2.0 2555   scaffold_285: 12659-15213
Prupe.3G026400 (1 of 1) PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) P. persica v2.1 3228   Pp03: 1937788-1941015
Kalax.1725s0002 (1 of 38) PTHR11764 - LANOSTEROL SYNTHASE K. laxiflora v1.1 1359   scaffold_1725: 14821-16179
Kalax.0073s0036 (1 of 11) PTHR11764:SF16 - ARABIDIOL SYNTHASE-RELATED K. laxiflora v1.1 2880   scaffold_73: 298414-301293
Aqcoe4G282400 (1 of 15) PTHR11764 - LANOSTEROL SYNTHASE A. coerulea v3.1 8202   Chr_04: 43167497-43175698
Aqcoe4G218700 (1 of 8) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase A. coerulea v3.1 19238   Chr_04: 34556802-34576039
Aqcoe2G216700 (1 of 8) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase A. coerulea v3.1 4344   Chr_02: 27087461-27091804
AL2G39410 (1 of 2) K15815 - lupeol synthase 2 (LUP2) A. lyrata v2.1 4887   scaffold_2: 18426853-18431739
Tp57577_TGAC_v2_gene36518 (1 of 18) PTHR11764 - LANOSTEROL SYNTHASE T. pratense v2 3452   Tp57577_TGAC_v2_LG5: 1482375-1485826
Solyc12g035460.1 (1 of 6) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase S. lycopersicum ITAG2.4 2054   SL2.50ch12: 58332429-58334482
AUR62027975 (1 of 8) 5.4.99.41 - Lupeol synthase C. quinoa v1.0 10377   C_Quinoa_Scaffold_2487: 2893493-2903869

50 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29702.m000164 R. communis v0.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 2 5272 Eudicot
33225.m000015 R. communis v0.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 2 5272 Eudicot
orange1.1g010631m C. sinensis v1.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 1 5272 Eudicot
Ciclev10031300m C. clementina v1.0 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 2 5272 Eudicot
SapurV1A.0660s0220.1.p S. purpurea v1.0 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 4 5272 Eudicot
Eucgr.L01637.1.p E. grandis v2.0 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 3 5272 Eudicot
Eucgr.F04226.1.p E. grandis v2.0 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 3 5272 Eudicot
Prupe.3G026400.1.p P. persica v2.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 1 5272 Eudicot
Aqcoe2G216700.1.p A. coerulea v3.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 3 5272 Eudicot
Aqcoe4G282400.1.p A. coerulea v3.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 3 5272 Eudicot
Aqcoe4G218700.1.p A. coerulea v3.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 3 5272 Eudicot
Podel.14G002800.1.p P. deltoides WV94 v2.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 3 5272 Eudicot
PGSC0003DMP400042002 S. tuberosum v4.03 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 1 5272 Eudicot
VIT_204s0008g02980.1 V. vinifera v2.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 5 5272 Eudicot
VIT_209s0054g01340.1 V. vinifera v2.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 5 5272 Eudicot
VIT_209s0054g01360.1 V. vinifera v2.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 5 5272 Eudicot
VIT_209s0054g01470.1 V. vinifera v2.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 5 5272 Eudicot
Lsat_1_v5_gn_1_77381.1 L. sativa V8 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 1 5272 Eudicot
MD17G1246300 M. domestica v1.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 5 5272 Eudicot
MD17G1159900 M. domestica v1.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 5 5272 Eudicot
MD17G1245900 M. domestica v1.1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 5 5272 Eudicot
gene10905-v2.0.a2-hybrid.t1 F. vesca v2.0.a2 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 1 5272 Eudicot
Cucsa.033950.1 C. sativus v1.0 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 2 5272 Eudicot
Cucsa.033940.1 C. sativus v1.0 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 2 5272 Eudicot
Ciclev10031967m C. clementina v1.0 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 2 5272 Eudicot
Lus10019674 L. usitatissimum v1.0 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 3 5272 Eudicot
Lus10019673 L. usitatissimum v1.0 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 3 5272 Eudicot
Lus10016438 L. usitatissimum v1.0 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 3 5272 Eudicot
Migut.D01712.1.p M. guttatus v2.0 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 1 5272 Eudicot
Glyma.15G065600.1.p G. max Wm82.a2.v1 122797329 PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) 1 5272 Eudicot