Gene : Eucgr.F04220 E. grandis v2.0
Defline:  (1 of 19) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase Genomic Order:  3753
Name:  ? Eucgr.F04220 Secondary Identifier:  ? PAC:32055365
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5203 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04220 0.5kb upstream 0.5kb upstream 4237 true Chr06: 52907220-52911456 Eucalyptus grandis
Eucgr.F04220 0.5kb upstream 0.5kb upstream 500 false Chr06: 52910957-52911456 Eucalyptus grandis
Eucgr.F04220 0.5kb downstream 0.5kb downstream 4237 true Chr06: 52906720-52910956 Eucalyptus grandis
Eucgr.F04220 0.5kb downstream 0.5kb downstream 500 false Chr06: 52906720-52907219 Eucalyptus grandis
Eucgr.F04220 1.0kb upstream 1.0kb upstream 4737 true Chr06: 52907220-52911956 Eucalyptus grandis
Eucgr.F04220 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52910957-52911956 Eucalyptus grandis
Eucgr.F04220 1.0kb downstream 1.0kb downstream 4737 true Chr06: 52906220-52910956 Eucalyptus grandis
Eucgr.F04220 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52906220-52907219 Eucalyptus grandis
Eucgr.F04220 2.0kb upstream 2.0kb upstream 5737 true Chr06: 52907220-52912956 Eucalyptus grandis
Eucgr.F04220 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52910957-52912956 Eucalyptus grandis
Eucgr.F04220 2.0kb downstream 2.0kb downstream 5737 true Chr06: 52905220-52910956 Eucalyptus grandis
Eucgr.F04220 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52905220-52907219 Eucalyptus grandis
Eucgr.F04220 5.0kb upstream 5.0kb upstream 8737 true Chr06: 52907220-52915956 Eucalyptus grandis
Eucgr.F04220 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52910957-52915956 Eucalyptus grandis
Eucgr.F04220 5.0kb downstream 5.0kb downstream 8737 true Chr06: 52902220-52910956 Eucalyptus grandis
Eucgr.F04220 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52902220-52907219 Eucalyptus grandis
Eucgr.F04220 10.0kb upstream 10.0kb upstream 13737 true Chr06: 52907220-52920956 Eucalyptus grandis
Eucgr.F04220 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52910957-52920956 Eucalyptus grandis
Eucgr.F04220 10.0kb downstream 10.0kb downstream 13737 true Chr06: 52897220-52910956 Eucalyptus grandis
Eucgr.F04220 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52897220-52907219 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028959 5273 Angiosperm View MSA
124073240 5270 Rosid View MSA
123747088 5271 Pentapetalae View MSA
122797329 5272 Eudicot View MSA
121298379 5274 Embryophyte View MSA
123336355 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.1871 0.0 0.680856 Low  
cufflinks 0.215532 0.0 0.762564 Low  
cufflinks 0.732101 0.0 2.21769    
cufflinks 0.0584807 0.0 0.281521 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.01963 0.0 3.01461   High

0 Strain