Gene : Eucgr.L01637 E. grandis v2.0
Defline:  (1 of 19) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase Genomic Order:  1
Name:  ? Eucgr.L01637 Secondary Identifier:  ? PAC:32027767
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5203 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01637 0.5kb upstream 0.5kb upstream 3055 true scaffold_285: 12659-15713 Eucalyptus grandis
Eucgr.L01637 0.5kb upstream 0.5kb upstream 500 false scaffold_285: 15214-15713 Eucalyptus grandis
Eucgr.L01637 0.5kb downstream 0.5kb downstream 3055 true scaffold_285: 12159-15213 Eucalyptus grandis
Eucgr.L01637 0.5kb downstream 0.5kb downstream 500 false scaffold_285: 12159-12658 Eucalyptus grandis
Eucgr.L01637 1.0kb upstream 1.0kb upstream 3555 true scaffold_285: 12659-16213 Eucalyptus grandis
Eucgr.L01637 1.0kb upstream 1.0kb upstream 1000 false scaffold_285: 15214-16213 Eucalyptus grandis
Eucgr.L01637 1.0kb downstream 1.0kb downstream 3555 true scaffold_285: 11659-15213 Eucalyptus grandis
Eucgr.L01637 1.0kb downstream 1.0kb downstream 1000 false scaffold_285: 11659-12658 Eucalyptus grandis
Eucgr.L01637 2.0kb upstream 2.0kb upstream 4555 true scaffold_285: 12659-17213 Eucalyptus grandis
Eucgr.L01637 2.0kb upstream 2.0kb upstream 2000 false scaffold_285: 15214-17213 Eucalyptus grandis
Eucgr.L01637 2.0kb downstream 2.0kb downstream 4555 true scaffold_285: 10659-15213 Eucalyptus grandis
Eucgr.L01637 2.0kb downstream 2.0kb downstream 2000 false scaffold_285: 10659-12658 Eucalyptus grandis
Eucgr.L01637 5.0kb upstream 5.0kb upstream 7555 true scaffold_285: 12659-20213 Eucalyptus grandis
Eucgr.L01637 5.0kb upstream 5.0kb upstream 5000 false scaffold_285: 15214-20213 Eucalyptus grandis
Eucgr.L01637 5.0kb downstream 5.0kb downstream 7555 true scaffold_285: 7659-15213 Eucalyptus grandis
Eucgr.L01637 5.0kb downstream 5.0kb downstream 5000 false scaffold_285: 7659-12658 Eucalyptus grandis
Eucgr.L01637 10.0kb upstream 10.0kb upstream 12555 true scaffold_285: 12659-25213 Eucalyptus grandis
Eucgr.L01637 10.0kb upstream 10.0kb upstream 10000 false scaffold_285: 15214-25213 Eucalyptus grandis
Eucgr.L01637 10.0kb downstream 10.0kb downstream 12555 true scaffold_285: 2659-15213 Eucalyptus grandis
Eucgr.L01637 10.0kb downstream 10.0kb downstream 10000 false scaffold_285: 2659-12658 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028959 5273 Angiosperm View MSA
124073240 5270 Rosid View MSA
123747088 5271 Pentapetalae View MSA
122797329 5272 Eudicot View MSA
121298379 5274 Embryophyte View MSA
123336355 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0977283 0.0 0.399161 Low Low
cufflinks 0.132878 0.0 0.500553 Low  
cufflinks 0.113125 0.0 0.437118 Low  
cufflinks 0.265174 0.0 0.910539 Low  
cufflinks 0.309709 0.0 1.04848 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain