Gene : Medtr8g016520 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF04983//PF04998//PF05000 - RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // RNA polymerase Rpb1, domain 4 (RNA_pol_Rpb1_4) Description:  DNA-directed RNA polymerase subunit beta
Genomic Order:  798 Name:  ? Medtr8g016520
Secondary Identifier:  ? PAC:31072840
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g016520 0.5kb upstream 0.5kb upstream 1298   true chr8: 5582144-5583441 Medicago truncatula
Medtr8g016520 0.5kb upstream 0.5kb upstream 500   false chr8: 5582144-5582643 Medicago truncatula
Medtr8g016520 0.5kb downstream 0.5kb downstream 1298   true chr8: 5582644-5583941 Medicago truncatula
Medtr8g016520 0.5kb downstream 0.5kb downstream 500   false chr8: 5583442-5583941 Medicago truncatula
Medtr8g016520 1.0kb upstream 1.0kb upstream 1798   true chr8: 5581644-5583441 Medicago truncatula
Medtr8g016520 1.0kb upstream 1.0kb upstream 1000   false chr8: 5581644-5582643 Medicago truncatula
Medtr8g016520 1.0kb downstream 1.0kb downstream 1798   true chr8: 5582644-5584441 Medicago truncatula
Medtr8g016520 1.0kb downstream 1.0kb downstream 1000   false chr8: 5583442-5584441 Medicago truncatula
Medtr8g016520 2.0kb upstream 2.0kb upstream 2798   true chr8: 5580644-5583441 Medicago truncatula
Medtr8g016520 2.0kb upstream 2.0kb upstream 2000   false chr8: 5580644-5582643 Medicago truncatula
Medtr8g016520 2.0kb downstream 2.0kb downstream 2798   true chr8: 5582644-5585441 Medicago truncatula
Medtr8g016520 2.0kb downstream 2.0kb downstream 2000   false chr8: 5583442-5585441 Medicago truncatula
Medtr8g016520 5.0kb upstream 5.0kb upstream 5798   true chr8: 5577644-5583441 Medicago truncatula
Medtr8g016520 5.0kb upstream 5.0kb upstream 5000   false chr8: 5577644-5582643 Medicago truncatula
Medtr8g016520 5.0kb downstream 5.0kb downstream 5798   true chr8: 5582644-5588441 Medicago truncatula
Medtr8g016520 5.0kb downstream 5.0kb downstream 5000   false chr8: 5583442-5588441 Medicago truncatula
Medtr8g016520 10.0kb upstream 10.0kb upstream 10798   true chr8: 5572644-5583441 Medicago truncatula
Medtr8g016520 10.0kb upstream 10.0kb upstream 10000   false chr8: 5572644-5582643 Medicago truncatula
Medtr8g016520 10.0kb downstream 10.0kb downstream 10798   true chr8: 5582644-5593441 Medicago truncatula
Medtr8g016520 10.0kb downstream 10.0kb downstream 10000   false chr8: 5583442-5593441 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026804 5273 Angiosperm View MSA
122269136 5265 Fabidae Singleton cluster - no MSA
124037710 5270 Rosid View MSA
123753178 5271 Pentapetalae View MSA
122774986 5272 Eudicot View MSA
121296570 5274 Embryophyte View MSA
123334713 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain