Gene : Medtr8g018400 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR24031:SF294 - EUKARYOTIC INITIATION FACTOR 4A-1-RELATED Description:  DEAD-box ATP-dependent RNA helicase
Genomic Order:  885 Name:  ? Medtr8g018400
Secondary Identifier:  ? PAC:31072754
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g018400 0.5kb upstream 0.5kb upstream 4892   true chr8: 6248871-6253762 Medicago truncatula
Medtr8g018400 0.5kb upstream 0.5kb upstream 500   false chr8: 6253263-6253762 Medicago truncatula
Medtr8g018400 0.5kb downstream 0.5kb downstream 4892   true chr8: 6248371-6253262 Medicago truncatula
Medtr8g018400 0.5kb downstream 0.5kb downstream 500   false chr8: 6248371-6248870 Medicago truncatula
Medtr8g018400 1.0kb upstream 1.0kb upstream 5392   true chr8: 6248871-6254262 Medicago truncatula
Medtr8g018400 1.0kb upstream 1.0kb upstream 1000   false chr8: 6253263-6254262 Medicago truncatula
Medtr8g018400 1.0kb downstream 1.0kb downstream 5392   true chr8: 6247871-6253262 Medicago truncatula
Medtr8g018400 1.0kb downstream 1.0kb downstream 1000   false chr8: 6247871-6248870 Medicago truncatula
Medtr8g018400 2.0kb upstream 2.0kb upstream 6392   true chr8: 6248871-6255262 Medicago truncatula
Medtr8g018400 2.0kb upstream 2.0kb upstream 2000   false chr8: 6253263-6255262 Medicago truncatula
Medtr8g018400 2.0kb downstream 2.0kb downstream 6392   true chr8: 6246871-6253262 Medicago truncatula
Medtr8g018400 2.0kb downstream 2.0kb downstream 2000   false chr8: 6246871-6248870 Medicago truncatula
Medtr8g018400 5.0kb upstream 5.0kb upstream 9392   true chr8: 6248871-6258262 Medicago truncatula
Medtr8g018400 5.0kb upstream 5.0kb upstream 5000   false chr8: 6253263-6258262 Medicago truncatula
Medtr8g018400 5.0kb downstream 5.0kb downstream 9392   true chr8: 6243871-6253262 Medicago truncatula
Medtr8g018400 5.0kb downstream 5.0kb downstream 5000   false chr8: 6243871-6248870 Medicago truncatula
Medtr8g018400 10.0kb upstream 10.0kb upstream 14392   true chr8: 6248871-6263262 Medicago truncatula
Medtr8g018400 10.0kb upstream 10.0kb upstream 10000   false chr8: 6253263-6263262 Medicago truncatula
Medtr8g018400 10.0kb downstream 10.0kb downstream 14392   true chr8: 6238871-6253262 Medicago truncatula
Medtr8g018400 10.0kb downstream 10.0kb downstream 10000   false chr8: 6238871-6248870 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315314 5265 Fabidae View MSA
124071119 5270 Rosid View MSA
123753006 5271 Pentapetalae View MSA
122788239 5272 Eudicot View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.702       Low
cufflinks 2.13        
cufflinks 2.51        
cufflinks 4.629       High
cufflinks 2.66        
cufflinks 1.568       Low
cufflinks 4.353        
cufflinks 1.983        
cufflinks 5.725       High

0 Strain