Gene : Medtr8g019500 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR30508:SF1 - UPF0051 PROTEIN ABCI8, CHLOROPLASTIC-RELATED Description:  iron-regulated ABC transporter membrane component SufB
Genomic Order:  952 Name:  ? Medtr8g019500
Secondary Identifier:  ? PAC:31072512
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g019500 0.5kb upstream 0.5kb upstream 4277   true chr8: 6865170-6869446 Medicago truncatula
Medtr8g019500 0.5kb upstream 0.5kb upstream 500   false chr8: 6868947-6869446 Medicago truncatula
Medtr8g019500 0.5kb downstream 0.5kb downstream 4277   true chr8: 6864670-6868946 Medicago truncatula
Medtr8g019500 0.5kb downstream 0.5kb downstream 500   false chr8: 6864670-6865169 Medicago truncatula
Medtr8g019500 1.0kb upstream 1.0kb upstream 4777   true chr8: 6865170-6869946 Medicago truncatula
Medtr8g019500 1.0kb upstream 1.0kb upstream 1000   false chr8: 6868947-6869946 Medicago truncatula
Medtr8g019500 1.0kb downstream 1.0kb downstream 4777   true chr8: 6864170-6868946 Medicago truncatula
Medtr8g019500 1.0kb downstream 1.0kb downstream 1000   false chr8: 6864170-6865169 Medicago truncatula
Medtr8g019500 2.0kb upstream 2.0kb upstream 5777   true chr8: 6865170-6870946 Medicago truncatula
Medtr8g019500 2.0kb upstream 2.0kb upstream 2000   false chr8: 6868947-6870946 Medicago truncatula
Medtr8g019500 2.0kb downstream 2.0kb downstream 5777   true chr8: 6863170-6868946 Medicago truncatula
Medtr8g019500 2.0kb downstream 2.0kb downstream 2000   false chr8: 6863170-6865169 Medicago truncatula
Medtr8g019500 5.0kb upstream 5.0kb upstream 8777   true chr8: 6865170-6873946 Medicago truncatula
Medtr8g019500 5.0kb upstream 5.0kb upstream 5000   false chr8: 6868947-6873946 Medicago truncatula
Medtr8g019500 5.0kb downstream 5.0kb downstream 8777   true chr8: 6860170-6868946 Medicago truncatula
Medtr8g019500 5.0kb downstream 5.0kb downstream 5000   false chr8: 6860170-6865169 Medicago truncatula
Medtr8g019500 10.0kb upstream 10.0kb upstream 13777   true chr8: 6865170-6878946 Medicago truncatula
Medtr8g019500 10.0kb upstream 10.0kb upstream 10000   false chr8: 6868947-6878946 Medicago truncatula
Medtr8g019500 10.0kb downstream 10.0kb downstream 13777   true chr8: 6855170-6868946 Medicago truncatula
Medtr8g019500 10.0kb downstream 10.0kb downstream 10000   false chr8: 6855170-6865169 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305326 5265 Fabidae View MSA
124060841 5270 Rosid View MSA
123742833 5271 Pentapetalae View MSA
122792679 5272 Eudicot View MSA
122051474 5273 Angiosperm View MSA
121345946 5274 Embryophyte View MSA
123424242 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.372        
cufflinks 18.955     High  
cufflinks 22.335     High High
cufflinks 3.859        
cufflinks 23.998     High High
cufflinks 2.571       Low
cufflinks 5.71        
cufflinks 23.132     High High
cufflinks 3.304       Low

0 Strain