Gene : Medtr8g019560 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12854 - ATAXIN 2-RELATED Description:  CTC-interacting domain protein
Genomic Order:  957 Name:  ? Medtr8g019560
Secondary Identifier:  ? PAC:31072378
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g019560 0.5kb upstream 0.5kb upstream 10479   true chr8: 6903209-6913687 Medicago truncatula
Medtr8g019560 0.5kb upstream 0.5kb upstream 500   false chr8: 6913188-6913687 Medicago truncatula
Medtr8g019560 0.5kb downstream 0.5kb downstream 10479   true chr8: 6902709-6913187 Medicago truncatula
Medtr8g019560 0.5kb downstream 0.5kb downstream 500   false chr8: 6902709-6903208 Medicago truncatula
Medtr8g019560 1.0kb upstream 1.0kb upstream 10979   true chr8: 6903209-6914187 Medicago truncatula
Medtr8g019560 1.0kb upstream 1.0kb upstream 1000   false chr8: 6913188-6914187 Medicago truncatula
Medtr8g019560 1.0kb downstream 1.0kb downstream 10979   true chr8: 6902209-6913187 Medicago truncatula
Medtr8g019560 1.0kb downstream 1.0kb downstream 1000   false chr8: 6902209-6903208 Medicago truncatula
Medtr8g019560 2.0kb upstream 2.0kb upstream 11979   true chr8: 6903209-6915187 Medicago truncatula
Medtr8g019560 2.0kb upstream 2.0kb upstream 2000   false chr8: 6913188-6915187 Medicago truncatula
Medtr8g019560 2.0kb downstream 2.0kb downstream 11979   true chr8: 6901209-6913187 Medicago truncatula
Medtr8g019560 2.0kb downstream 2.0kb downstream 2000   false chr8: 6901209-6903208 Medicago truncatula
Medtr8g019560 5.0kb upstream 5.0kb upstream 14979   true chr8: 6903209-6918187 Medicago truncatula
Medtr8g019560 5.0kb upstream 5.0kb upstream 5000   false chr8: 6913188-6918187 Medicago truncatula
Medtr8g019560 5.0kb downstream 5.0kb downstream 14979   true chr8: 6898209-6913187 Medicago truncatula
Medtr8g019560 5.0kb downstream 5.0kb downstream 5000   false chr8: 6898209-6903208 Medicago truncatula
Medtr8g019560 10.0kb upstream 10.0kb upstream 19979   true chr8: 6903209-6923187 Medicago truncatula
Medtr8g019560 10.0kb upstream 10.0kb upstream 10000   false chr8: 6913188-6923187 Medicago truncatula
Medtr8g019560 10.0kb downstream 10.0kb downstream 19979   true chr8: 6893209-6913187 Medicago truncatula
Medtr8g019560 10.0kb downstream 10.0kb downstream 10000   false chr8: 6893209-6903208 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310988 5265 Fabidae View MSA
124063578 5270 Rosid View MSA
123743281 5271 Pentapetalae View MSA
122790252 5272 Eudicot View MSA
122049882 5273 Angiosperm View MSA
121348132 5274 Embryophyte View MSA
123427801 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.578       High
cufflinks 4.403        
cufflinks 5.906       High
cufflinks 3.67        
cufflinks 4.127        
cufflinks 2.449       Low
cufflinks 4.083        
cufflinks 4.457        
cufflinks 3.827        

0 Strain