Gene : Medtr8g009900 M. truncatula Mt4.0v1
Defline:  (1 of 3) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Description:  glutamyl-tRNA synthetase
Genomic Order:  339 Name:  ? Medtr8g009900
Secondary Identifier:  ? PAC:31075614
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5188 Medicago truncatula pathologic  
Mtruncatula PWY-5918 Medicago truncatula pathologic  
Mtruncatula TRNA-CHARGING-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g009900 0.5kb upstream 0.5kb upstream 6465   true chr8: 2456019-2462483 Medicago truncatula
Medtr8g009900 0.5kb upstream 0.5kb upstream 500   false chr8: 2456019-2456518 Medicago truncatula
Medtr8g009900 0.5kb downstream 0.5kb downstream 6465   true chr8: 2456519-2462983 Medicago truncatula
Medtr8g009900 0.5kb downstream 0.5kb downstream 500   false chr8: 2462484-2462983 Medicago truncatula
Medtr8g009900 1.0kb upstream 1.0kb upstream 6965   true chr8: 2455519-2462483 Medicago truncatula
Medtr8g009900 1.0kb upstream 1.0kb upstream 1000   false chr8: 2455519-2456518 Medicago truncatula
Medtr8g009900 1.0kb downstream 1.0kb downstream 6965   true chr8: 2456519-2463483 Medicago truncatula
Medtr8g009900 1.0kb downstream 1.0kb downstream 1000   false chr8: 2462484-2463483 Medicago truncatula
Medtr8g009900 2.0kb upstream 2.0kb upstream 7965   true chr8: 2454519-2462483 Medicago truncatula
Medtr8g009900 2.0kb upstream 2.0kb upstream 2000   false chr8: 2454519-2456518 Medicago truncatula
Medtr8g009900 2.0kb downstream 2.0kb downstream 7965   true chr8: 2456519-2464483 Medicago truncatula
Medtr8g009900 2.0kb downstream 2.0kb downstream 2000   false chr8: 2462484-2464483 Medicago truncatula
Medtr8g009900 5.0kb upstream 5.0kb upstream 10965   true chr8: 2451519-2462483 Medicago truncatula
Medtr8g009900 5.0kb upstream 5.0kb upstream 5000   false chr8: 2451519-2456518 Medicago truncatula
Medtr8g009900 5.0kb downstream 5.0kb downstream 10965   true chr8: 2456519-2467483 Medicago truncatula
Medtr8g009900 5.0kb downstream 5.0kb downstream 5000   false chr8: 2462484-2467483 Medicago truncatula
Medtr8g009900 10.0kb upstream 10.0kb upstream 15965   true chr8: 2446519-2462483 Medicago truncatula
Medtr8g009900 10.0kb upstream 10.0kb upstream 10000   false chr8: 2446519-2456518 Medicago truncatula
Medtr8g009900 10.0kb downstream 10.0kb downstream 15965   true chr8: 2456519-2472483 Medicago truncatula
Medtr8g009900 10.0kb downstream 10.0kb downstream 10000   false chr8: 2462484-2472483 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301417 5265 Fabidae View MSA
124063360 5270 Rosid View MSA
123737264 5271 Pentapetalae View MSA
122787973 5272 Eudicot View MSA
122041760 5273 Angiosperm View MSA
121345245 5274 Embryophyte View MSA
123424323 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.762        
cufflinks 5.221        
cufflinks 4.848        
cufflinks 1.925        
cufflinks 7.763       High
cufflinks 0.783       Low
cufflinks 2.353        
cufflinks 5.992        
cufflinks 1.698        

0 Strain