Gene : Medtr8g012340 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF00254//PF07719//PF13414 - FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C) // Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) Description:  peptidyl-prolyl cis-trans isomerase FKBP62-like protein
Genomic Order:  500 Name:  ? Medtr8g012340
Secondary Identifier:  ? PAC:31071669
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g012340 0.5kb upstream 0.5kb upstream 5392   true chr8: 3493093-3498484 Medicago truncatula
Medtr8g012340 0.5kb upstream 0.5kb upstream 500   false chr8: 3497985-3498484 Medicago truncatula
Medtr8g012340 0.5kb downstream 0.5kb downstream 5392   true chr8: 3492593-3497984 Medicago truncatula
Medtr8g012340 0.5kb downstream 0.5kb downstream 500   false chr8: 3492593-3493092 Medicago truncatula
Medtr8g012340 1.0kb upstream 1.0kb upstream 5892   true chr8: 3493093-3498984 Medicago truncatula
Medtr8g012340 1.0kb upstream 1.0kb upstream 1000   false chr8: 3497985-3498984 Medicago truncatula
Medtr8g012340 1.0kb downstream 1.0kb downstream 5892   true chr8: 3492093-3497984 Medicago truncatula
Medtr8g012340 1.0kb downstream 1.0kb downstream 1000   false chr8: 3492093-3493092 Medicago truncatula
Medtr8g012340 2.0kb upstream 2.0kb upstream 6892   true chr8: 3493093-3499984 Medicago truncatula
Medtr8g012340 2.0kb upstream 2.0kb upstream 2000   false chr8: 3497985-3499984 Medicago truncatula
Medtr8g012340 2.0kb downstream 2.0kb downstream 6892   true chr8: 3491093-3497984 Medicago truncatula
Medtr8g012340 2.0kb downstream 2.0kb downstream 2000   false chr8: 3491093-3493092 Medicago truncatula
Medtr8g012340 5.0kb upstream 5.0kb upstream 9892   true chr8: 3493093-3502984 Medicago truncatula
Medtr8g012340 5.0kb upstream 5.0kb upstream 5000   false chr8: 3497985-3502984 Medicago truncatula
Medtr8g012340 5.0kb downstream 5.0kb downstream 9892   true chr8: 3488093-3497984 Medicago truncatula
Medtr8g012340 5.0kb downstream 5.0kb downstream 5000   false chr8: 3488093-3493092 Medicago truncatula
Medtr8g012340 10.0kb upstream 10.0kb upstream 14892   true chr8: 3493093-3507984 Medicago truncatula
Medtr8g012340 10.0kb upstream 10.0kb upstream 10000   false chr8: 3497985-3507984 Medicago truncatula
Medtr8g012340 10.0kb downstream 10.0kb downstream 14892   true chr8: 3483093-3497984 Medicago truncatula
Medtr8g012340 10.0kb downstream 10.0kb downstream 10000   false chr8: 3483093-3493092 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302998 5265 Fabidae View MSA
124067136 5270 Rosid View MSA
123746363 5271 Pentapetalae View MSA
122792796 5272 Eudicot View MSA
122047440 5273 Angiosperm View MSA
121347490 5274 Embryophyte View MSA
123426312 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.175     High High
cufflinks 7.607        
cufflinks 6.017        
cufflinks 2.547       Low
cufflinks 15.171     High  
cufflinks 6.754        
cufflinks 14.745     High  
cufflinks 5.941        
cufflinks 12.046     High  

0 Strain