Gene : Medtr8g076830 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10744//PTHR10744:SF10 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER Description:  40S ribosomal protein S11-1
Genomic Order:  3962 Name:  ? Medtr8g076830
Secondary Identifier:  ? PAC:31070324
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g076830 0.5kb upstream 0.5kb upstream 3021   true chr8: 32586048-32589068 Medicago truncatula
Medtr8g076830 0.5kb upstream 0.5kb upstream 500   false chr8: 32588569-32589068 Medicago truncatula
Medtr8g076830 0.5kb downstream 0.5kb downstream 3021   true chr8: 32585548-32588568 Medicago truncatula
Medtr8g076830 0.5kb downstream 0.5kb downstream 500   false chr8: 32585548-32586047 Medicago truncatula
Medtr8g076830 1.0kb upstream 1.0kb upstream 3521   true chr8: 32586048-32589568 Medicago truncatula
Medtr8g076830 1.0kb upstream 1.0kb upstream 1000   false chr8: 32588569-32589568 Medicago truncatula
Medtr8g076830 1.0kb downstream 1.0kb downstream 3521   true chr8: 32585048-32588568 Medicago truncatula
Medtr8g076830 1.0kb downstream 1.0kb downstream 1000   false chr8: 32585048-32586047 Medicago truncatula
Medtr8g076830 2.0kb upstream 2.0kb upstream 4521   true chr8: 32586048-32590568 Medicago truncatula
Medtr8g076830 2.0kb upstream 2.0kb upstream 2000   false chr8: 32588569-32590568 Medicago truncatula
Medtr8g076830 2.0kb downstream 2.0kb downstream 4521   true chr8: 32584048-32588568 Medicago truncatula
Medtr8g076830 2.0kb downstream 2.0kb downstream 2000   false chr8: 32584048-32586047 Medicago truncatula
Medtr8g076830 5.0kb upstream 5.0kb upstream 7521   true chr8: 32586048-32593568 Medicago truncatula
Medtr8g076830 5.0kb upstream 5.0kb upstream 5000   false chr8: 32588569-32593568 Medicago truncatula
Medtr8g076830 5.0kb downstream 5.0kb downstream 7521   true chr8: 32581048-32588568 Medicago truncatula
Medtr8g076830 5.0kb downstream 5.0kb downstream 5000   false chr8: 32581048-32586047 Medicago truncatula
Medtr8g076830 10.0kb upstream 10.0kb upstream 12521   true chr8: 32586048-32598568 Medicago truncatula
Medtr8g076830 10.0kb upstream 10.0kb upstream 10000   false chr8: 32588569-32598568 Medicago truncatula
Medtr8g076830 10.0kb downstream 10.0kb downstream 12521   true chr8: 32576048-32588568 Medicago truncatula
Medtr8g076830 10.0kb downstream 10.0kb downstream 10000   false chr8: 32576048-32586047 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308230 5265 Fabidae View MSA
124061997 5270 Rosid View MSA
123740255 5271 Pentapetalae View MSA
122794687 5272 Eudicot View MSA
122044220 5273 Angiosperm View MSA
121344694 5274 Embryophyte View MSA
123428242 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.286     High Low
cufflinks 27.641     High Low
cufflinks 30.903     High  
cufflinks 70.89     High High
cufflinks 48.261     High  
cufflinks 55.693     High  
cufflinks 46.023     High  
cufflinks 34.804     High  
cufflinks 79.033     High High

0 Strain