Gene : Medtr8g078270 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10891:SF568 - CALCIUM-BINDING PROTEIN CML41-RELATED Description:  EF hand calcium-binding family protein
Genomic Order:  4062 Name:  ? Medtr8g078270
Secondary Identifier:  ? PAC:31070521
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g078270 0.5kb upstream 0.5kb upstream 1443   true chr8: 33365528-33366970 Medicago truncatula
Medtr8g078270 0.5kb upstream 0.5kb upstream 500   false chr8: 33365528-33366027 Medicago truncatula
Medtr8g078270 0.5kb downstream 0.5kb downstream 1443   true chr8: 33366028-33367470 Medicago truncatula
Medtr8g078270 0.5kb downstream 0.5kb downstream 500   false chr8: 33366971-33367470 Medicago truncatula
Medtr8g078270 1.0kb upstream 1.0kb upstream 1943   true chr8: 33365028-33366970 Medicago truncatula
Medtr8g078270 1.0kb upstream 1.0kb upstream 1000   false chr8: 33365028-33366027 Medicago truncatula
Medtr8g078270 1.0kb downstream 1.0kb downstream 1943   true chr8: 33366028-33367970 Medicago truncatula
Medtr8g078270 1.0kb downstream 1.0kb downstream 1000   false chr8: 33366971-33367970 Medicago truncatula
Medtr8g078270 2.0kb upstream 2.0kb upstream 2943   true chr8: 33364028-33366970 Medicago truncatula
Medtr8g078270 2.0kb upstream 2.0kb upstream 2000   false chr8: 33364028-33366027 Medicago truncatula
Medtr8g078270 2.0kb downstream 2.0kb downstream 2943   true chr8: 33366028-33368970 Medicago truncatula
Medtr8g078270 2.0kb downstream 2.0kb downstream 2000   false chr8: 33366971-33368970 Medicago truncatula
Medtr8g078270 5.0kb upstream 5.0kb upstream 5943   true chr8: 33361028-33366970 Medicago truncatula
Medtr8g078270 5.0kb upstream 5.0kb upstream 5000   false chr8: 33361028-33366027 Medicago truncatula
Medtr8g078270 5.0kb downstream 5.0kb downstream 5943   true chr8: 33366028-33371970 Medicago truncatula
Medtr8g078270 5.0kb downstream 5.0kb downstream 5000   false chr8: 33366971-33371970 Medicago truncatula
Medtr8g078270 10.0kb upstream 10.0kb upstream 10943   true chr8: 33356028-33366970 Medicago truncatula
Medtr8g078270 10.0kb upstream 10.0kb upstream 10000   false chr8: 33356028-33366027 Medicago truncatula
Medtr8g078270 10.0kb downstream 10.0kb downstream 10943   true chr8: 33366028-33376970 Medicago truncatula
Medtr8g078270 10.0kb downstream 10.0kb downstream 10000   false chr8: 33366971-33376970 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309881 5265 Fabidae View MSA
124072795 5270 Rosid View MSA
123737357 5271 Pentapetalae View MSA
122787058 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.304     High High
cufflinks 5.085        
cufflinks 4.097        
cufflinks 0.171       Low
cufflinks 8.582        
cufflinks 4.58        
cufflinks 6.597        
cufflinks 4.025        
cufflinks 1.434        

0 Strain