Gene : Medtr8g078870 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR34058:SF1 - OXYGEN-EVOLVING ENHANCER PROTEIN 1-1, CHLOROPLASTIC-RELATED Description:  photosystem II oxygen-evolving enhancer protein
Genomic Order:  4095 Name:  ? Medtr8g078870
Secondary Identifier:  ? PAC:31072921
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g078870 0.5kb upstream 0.5kb upstream 2740   true chr8: 33605619-33608358 Medicago truncatula
Medtr8g078870 0.5kb upstream 0.5kb upstream 500   false chr8: 33607859-33608358 Medicago truncatula
Medtr8g078870 0.5kb downstream 0.5kb downstream 2740   true chr8: 33605119-33607858 Medicago truncatula
Medtr8g078870 0.5kb downstream 0.5kb downstream 500   false chr8: 33605119-33605618 Medicago truncatula
Medtr8g078870 1.0kb upstream 1.0kb upstream 3240   true chr8: 33605619-33608858 Medicago truncatula
Medtr8g078870 1.0kb upstream 1.0kb upstream 1000   false chr8: 33607859-33608858 Medicago truncatula
Medtr8g078870 1.0kb downstream 1.0kb downstream 3240   true chr8: 33604619-33607858 Medicago truncatula
Medtr8g078870 1.0kb downstream 1.0kb downstream 1000   false chr8: 33604619-33605618 Medicago truncatula
Medtr8g078870 2.0kb upstream 2.0kb upstream 4240   true chr8: 33605619-33609858 Medicago truncatula
Medtr8g078870 2.0kb upstream 2.0kb upstream 2000   false chr8: 33607859-33609858 Medicago truncatula
Medtr8g078870 2.0kb downstream 2.0kb downstream 4240   true chr8: 33603619-33607858 Medicago truncatula
Medtr8g078870 2.0kb downstream 2.0kb downstream 2000   false chr8: 33603619-33605618 Medicago truncatula
Medtr8g078870 5.0kb upstream 5.0kb upstream 7240   true chr8: 33605619-33612858 Medicago truncatula
Medtr8g078870 5.0kb upstream 5.0kb upstream 5000   false chr8: 33607859-33612858 Medicago truncatula
Medtr8g078870 5.0kb downstream 5.0kb downstream 7240   true chr8: 33600619-33607858 Medicago truncatula
Medtr8g078870 5.0kb downstream 5.0kb downstream 5000   false chr8: 33600619-33605618 Medicago truncatula
Medtr8g078870 10.0kb upstream 10.0kb upstream 12240   true chr8: 33605619-33617858 Medicago truncatula
Medtr8g078870 10.0kb upstream 10.0kb upstream 10000   false chr8: 33607859-33617858 Medicago truncatula
Medtr8g078870 10.0kb downstream 10.0kb downstream 12240   true chr8: 33595619-33607858 Medicago truncatula
Medtr8g078870 10.0kb downstream 10.0kb downstream 10000   false chr8: 33595619-33605618 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310095 5265 Fabidae View MSA
124063467 5270 Rosid View MSA
123739417 5271 Pentapetalae View MSA
122788254 5272 Eudicot View MSA
122047967 5273 Angiosperm View MSA
121344212 5274 Embryophyte View MSA
123425295 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.481     High  
cufflinks 2500.888     High High
cufflinks 2378.269     High High
cufflinks 6.786        
cufflinks 2318.466     High High
cufflinks 6.617        
cufflinks 9.307        
cufflinks 2611.188     High High
cufflinks 6.456        

0 Strain