Gene : Medtr8g072600 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG0376 - Serine-threonine phosphatase 2A, catalytic subunit Description:  serine/threonine-protein phosphatase
Genomic Order:  3693 Name:  ? Medtr8g072600
Secondary Identifier:  ? PAC:31072846
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g072600 0.5kb upstream 0.5kb upstream 6329   true chr8: 30687757-30694085 Medicago truncatula
Medtr8g072600 0.5kb upstream 0.5kb upstream 500   false chr8: 30693586-30694085 Medicago truncatula
Medtr8g072600 0.5kb downstream 0.5kb downstream 6329   true chr8: 30687257-30693585 Medicago truncatula
Medtr8g072600 0.5kb downstream 0.5kb downstream 500   false chr8: 30687257-30687756 Medicago truncatula
Medtr8g072600 1.0kb upstream 1.0kb upstream 6829   true chr8: 30687757-30694585 Medicago truncatula
Medtr8g072600 1.0kb upstream 1.0kb upstream 1000   false chr8: 30693586-30694585 Medicago truncatula
Medtr8g072600 1.0kb downstream 1.0kb downstream 6829   true chr8: 30686757-30693585 Medicago truncatula
Medtr8g072600 1.0kb downstream 1.0kb downstream 1000   false chr8: 30686757-30687756 Medicago truncatula
Medtr8g072600 2.0kb upstream 2.0kb upstream 7829   true chr8: 30687757-30695585 Medicago truncatula
Medtr8g072600 2.0kb upstream 2.0kb upstream 2000   false chr8: 30693586-30695585 Medicago truncatula
Medtr8g072600 2.0kb downstream 2.0kb downstream 7829   true chr8: 30685757-30693585 Medicago truncatula
Medtr8g072600 2.0kb downstream 2.0kb downstream 2000   false chr8: 30685757-30687756 Medicago truncatula
Medtr8g072600 5.0kb upstream 5.0kb upstream 10829   true chr8: 30687757-30698585 Medicago truncatula
Medtr8g072600 5.0kb upstream 5.0kb upstream 5000   false chr8: 30693586-30698585 Medicago truncatula
Medtr8g072600 5.0kb downstream 5.0kb downstream 10829   true chr8: 30682757-30693585 Medicago truncatula
Medtr8g072600 5.0kb downstream 5.0kb downstream 5000   false chr8: 30682757-30687756 Medicago truncatula
Medtr8g072600 10.0kb upstream 10.0kb upstream 15829   true chr8: 30687757-30703585 Medicago truncatula
Medtr8g072600 10.0kb upstream 10.0kb upstream 10000   false chr8: 30693586-30703585 Medicago truncatula
Medtr8g072600 10.0kb downstream 10.0kb downstream 15829   true chr8: 30677757-30693585 Medicago truncatula
Medtr8g072600 10.0kb downstream 10.0kb downstream 10000   false chr8: 30677757-30687756 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302308 5265 Fabidae View MSA
124063485 5270 Rosid View MSA
123740656 5271 Pentapetalae View MSA
122789089 5272 Eudicot View MSA
122047426 5273 Angiosperm View MSA
123429115 5275 Viridiplantae View MSA
121344801 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.399       Low
cufflinks 1.852       High
cufflinks 1.238        
cufflinks 0.771        
cufflinks 1.802        
cufflinks 0.668        
cufflinks 0.853        
cufflinks 1.124        
cufflinks 2.009       High

0 Strain