Gene : Medtr8g073190 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13954 - IRE1-RELATED Description:  endoribonuclease/kinase IRE1-like protein
Genomic Order:  3727 Name:  ? Medtr8g073190
Secondary Identifier:  ? PAC:31073559
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g073190 0.5kb upstream 0.5kb upstream 9252   true chr8: 30972745-30981996 Medicago truncatula
Medtr8g073190 0.5kb upstream 0.5kb upstream 500   false chr8: 30972745-30973244 Medicago truncatula
Medtr8g073190 0.5kb downstream 0.5kb downstream 9252   true chr8: 30973245-30982496 Medicago truncatula
Medtr8g073190 0.5kb downstream 0.5kb downstream 500   false chr8: 30981997-30982496 Medicago truncatula
Medtr8g073190 1.0kb upstream 1.0kb upstream 9752   true chr8: 30972245-30981996 Medicago truncatula
Medtr8g073190 1.0kb upstream 1.0kb upstream 1000   false chr8: 30972245-30973244 Medicago truncatula
Medtr8g073190 1.0kb downstream 1.0kb downstream 9752   true chr8: 30973245-30982996 Medicago truncatula
Medtr8g073190 1.0kb downstream 1.0kb downstream 1000   false chr8: 30981997-30982996 Medicago truncatula
Medtr8g073190 2.0kb upstream 2.0kb upstream 10752   true chr8: 30971245-30981996 Medicago truncatula
Medtr8g073190 2.0kb upstream 2.0kb upstream 2000   false chr8: 30971245-30973244 Medicago truncatula
Medtr8g073190 2.0kb downstream 2.0kb downstream 10752   true chr8: 30973245-30983996 Medicago truncatula
Medtr8g073190 2.0kb downstream 2.0kb downstream 2000   false chr8: 30981997-30983996 Medicago truncatula
Medtr8g073190 5.0kb upstream 5.0kb upstream 13752   true chr8: 30968245-30981996 Medicago truncatula
Medtr8g073190 5.0kb upstream 5.0kb upstream 5000   false chr8: 30968245-30973244 Medicago truncatula
Medtr8g073190 5.0kb downstream 5.0kb downstream 13752   true chr8: 30973245-30986996 Medicago truncatula
Medtr8g073190 5.0kb downstream 5.0kb downstream 5000   false chr8: 30981997-30986996 Medicago truncatula
Medtr8g073190 10.0kb upstream 10.0kb upstream 18752   true chr8: 30963245-30981996 Medicago truncatula
Medtr8g073190 10.0kb upstream 10.0kb upstream 10000   false chr8: 30963245-30973244 Medicago truncatula
Medtr8g073190 10.0kb downstream 10.0kb downstream 18752   true chr8: 30973245-30991996 Medicago truncatula
Medtr8g073190 10.0kb downstream 10.0kb downstream 10000   false chr8: 30981997-30991996 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313681 5265 Fabidae View MSA
124069221 5270 Rosid View MSA
123736649 5271 Pentapetalae View MSA
122796979 5272 Eudicot View MSA
122047028 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121347978 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.435       High
cufflinks 0.36        
cufflinks 0.326        
cufflinks 0.318       Low
cufflinks 0.383        
cufflinks 0.446       High
cufflinks 0.322       Low
cufflinks 0.346        
cufflinks 0.39        

0 Strain