Gene : Medtr8g063090 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31934:SF2 - RNA-DIRECTED DNA METHYLATION 4 Description:  hypothetical protein
Genomic Order:  3121 Name:  ? Medtr8g063090
Secondary Identifier:  ? PAC:31069546
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g063090 0.5kb upstream 0.5kb upstream 5972   true chr8: 26417259-26423230 Medicago truncatula
Medtr8g063090 0.5kb upstream 0.5kb upstream 500   false chr8: 26417259-26417758 Medicago truncatula
Medtr8g063090 0.5kb downstream 0.5kb downstream 5972   true chr8: 26417759-26423730 Medicago truncatula
Medtr8g063090 0.5kb downstream 0.5kb downstream 500   false chr8: 26423231-26423730 Medicago truncatula
Medtr8g063090 1.0kb upstream 1.0kb upstream 6472   true chr8: 26416759-26423230 Medicago truncatula
Medtr8g063090 1.0kb upstream 1.0kb upstream 1000   false chr8: 26416759-26417758 Medicago truncatula
Medtr8g063090 1.0kb downstream 1.0kb downstream 6472   true chr8: 26417759-26424230 Medicago truncatula
Medtr8g063090 1.0kb downstream 1.0kb downstream 1000   false chr8: 26423231-26424230 Medicago truncatula
Medtr8g063090 2.0kb upstream 2.0kb upstream 7472   true chr8: 26415759-26423230 Medicago truncatula
Medtr8g063090 2.0kb upstream 2.0kb upstream 2000   false chr8: 26415759-26417758 Medicago truncatula
Medtr8g063090 2.0kb downstream 2.0kb downstream 7472   true chr8: 26417759-26425230 Medicago truncatula
Medtr8g063090 2.0kb downstream 2.0kb downstream 2000   false chr8: 26423231-26425230 Medicago truncatula
Medtr8g063090 5.0kb upstream 5.0kb upstream 10472   true chr8: 26412759-26423230 Medicago truncatula
Medtr8g063090 5.0kb upstream 5.0kb upstream 5000   false chr8: 26412759-26417758 Medicago truncatula
Medtr8g063090 5.0kb downstream 5.0kb downstream 10472   true chr8: 26417759-26428230 Medicago truncatula
Medtr8g063090 5.0kb downstream 5.0kb downstream 5000   false chr8: 26423231-26428230 Medicago truncatula
Medtr8g063090 10.0kb upstream 10.0kb upstream 15472   true chr8: 26407759-26423230 Medicago truncatula
Medtr8g063090 10.0kb upstream 10.0kb upstream 10000   false chr8: 26407759-26417758 Medicago truncatula
Medtr8g063090 10.0kb downstream 10.0kb downstream 15472   true chr8: 26417759-26433230 Medicago truncatula
Medtr8g063090 10.0kb downstream 10.0kb downstream 10000   false chr8: 26423231-26433230 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299979 5265 Fabidae View MSA
124068776 5270 Rosid View MSA
123739864 5271 Pentapetalae View MSA
122793306 5272 Eudicot View MSA
122051086 5273 Angiosperm View MSA
121346551 5274 Embryophyte View MSA
123380403 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.548        
cufflinks 3.235        
cufflinks 4.832       High
cufflinks 0.724        
cufflinks 4.04        
cufflinks 0.234       Low
cufflinks 1.454        
cufflinks 3.735        
cufflinks 1.789        

0 Strain